BLASTX nr result

ID: Lithospermum22_contig00040226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040226
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]          109   3e-22
gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]          109   3e-22
gb|AED89988.1| PSL3a [Solanum chacoense x Solanum tuberosum]          109   3e-22
gb|AED89986.1| PSL1c [Solanum chacoense x Solanum tuberosum]          108   3e-22
gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]          108   3e-22

>gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]
          Length = 764

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
 Frame = +1

Query: 55  DSEKKIPVLTVLKNHSILKNIFILD-----PLQEENSGENVDAFEETVWIGRHPDCNIIL 219
           + EKKIPV TVLKN +ILKNIF+LD     P+    S E    FEE + +GRHPDCNI+L
Sbjct: 16  EEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQE----FEEILVVGRHPDCNIVL 71

Query: 220 EHPSISRFHLRIDFKPCXXXXXXXXXXXXHGTWVCGNKIKPNVRV 354
           EHPSISRFHLRI   P             HG+W+ GNKI+P VRV
Sbjct: 72  EHPSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRV 116


>gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]
          Length = 630

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
 Frame = +1

Query: 55  DSEKKIPVLTVLKNHSILKNIFILD-----PLQEENSGENVDAFEETVWIGRHPDCNIIL 219
           + EKKIPV TVLKN +ILKNIF+LD     P+    S E    FEE + +GRHPDCNI+L
Sbjct: 16  EEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQE----FEEILVVGRHPDCNIVL 71

Query: 220 EHPSISRFHLRIDFKPCXXXXXXXXXXXXHGTWVCGNKIKPNVRV 354
           EHPSISRFHLRI   P             HG+W+ GNKI+P VRV
Sbjct: 72  EHPSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRV 116


>gb|AED89988.1| PSL3a [Solanum chacoense x Solanum tuberosum]
          Length = 592

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
 Frame = +1

Query: 55  DSEKKIPVLTVLKNHSILKNIFILD-----PLQEENSGENVDAFEETVWIGRHPDCNIIL 219
           + EKKIPV TVLKN +ILKNIF+LD     P+    S E    FEE + +GRHPDCNI+L
Sbjct: 16  EEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQE----FEEILVVGRHPDCNIVL 71

Query: 220 EHPSISRFHLRIDFKPCXXXXXXXXXXXXHGTWVCGNKIKPNVRV 354
           EHPSISRFHLRI   P             HG+W+ GNKI+P VRV
Sbjct: 72  EHPSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRV 116


>gb|AED89986.1| PSL1c [Solanum chacoense x Solanum tuberosum]
          Length = 244

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
 Frame = +1

Query: 55  DSEKKIPVLTVLKNHSILKNIFILD--PLQEENSGENVDAFEETVWIGRHPDCNIILEHP 228
           + EKKIPV TVLKN +ILKNIF+LD  P        N + FEE + +GRHPDCNI+LEHP
Sbjct: 16  EEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITANQE-FEEILVVGRHPDCNIVLEHP 74

Query: 229 SISRFHLRIDFKPCXXXXXXXXXXXXHGTWVCGNKIKPNVRV 354
           SISRFHLRI   P             HG+W+ GNKI+P VRV
Sbjct: 75  SISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPQVRV 116


>gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]
          Length = 592

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
 Frame = +1

Query: 55  DSEKKIPVLTVLKNHSILKNIFILD--PLQEENSGENVDAFEETVWIGRHPDCNIILEHP 228
           + EKKIPV TVLKN +ILKNIF+LD  P        N + FEE + +GRHPDCNI+LEHP
Sbjct: 16  EEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITANQE-FEEILVVGRHPDCNIVLEHP 74

Query: 229 SISRFHLRIDFKPCXXXXXXXXXXXXHGTWVCGNKIKPNVRV 354
           SISRFHLRI   P             HG+W+ GNKI+P VRV
Sbjct: 75  SISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPQVRV 116


Top