BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040204
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsi...    78   8e-13
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    77   1e-12
emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]    77   1e-12
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    77   1e-12
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    77   2e-12

>gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1102

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
 Frame = +2

Query: 14   IIHVKEFLHHEFTIKDLGIAKYFLSIQIARLLQA-CIFLKQSTSHIIQDLKMENSYAIAT 190
            I H KE LH  F +KDLG  KYFL ++++R     C+  ++    II +  +      A 
Sbjct: 803  IDHFKEHLHKCFHMKDLGKLKYFLGLEVSRGADGFCLSQQKYALDIINEAGLLGYKPSAV 862

Query: 191  PLQVDWQAYDDNFPLLDDAXXXXXXXXXXXXXDFTRPGITHAVHHLSEFMQQPTLNHWNA 370
            P+++  +    + P+ D+                TRP +++AVH LS+FMQ P   HW+A
Sbjct: 863  PMELHHKLGSISSPVFDNPAQYRRLVDRFIYLTITRPDLSYAVHILSQFMQTPLEAHWHA 922

Query: 371  ALYIVKYLKGT 403
             L +V+YLKG+
Sbjct: 923  TLRLVRYLKGS 933


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
 Frame = +2

Query: 14   IIHVKEFLHHEFTIKDLGIAKYFLSIQIARLLQACIFLKQS--TSHIIQDLKMENSYAIA 187
            +   K +L   F +KDLG+ KYFL I+++R  Q   +L Q      II ++ +  +   A
Sbjct: 806  VAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQG-FYLSQRKYVLDIISEMGLLGARPSA 864

Query: 188  TPLQVDWQAYDDNFPLLDDAXXXXXXXXXXXXXDFTRPGITHAVHHLSEFMQQPTLNHWN 367
             PL+ + +      PLL D+               TRP ++++VH L++FMQ P  +HWN
Sbjct: 865  FPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWN 924

Query: 368  AALYIVKYLK 397
            AA+ +V+YLK
Sbjct: 925  AAIRVVRYLK 934


>emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
          Length = 660

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = +2

Query: 23  VKEFLHHEFTIKDLGIAKYFLSIQIARLLQACIFLKQS-TSHIIQDLKMENSYAIATPLQ 199
           VK FLH  FTIKDLG  KYFL I++AR  +  +  +Q  T  +++D    +S  +  P++
Sbjct: 507 VKRFLHESFTIKDLGELKYFLGIEVARSAKGIVLSQQKYTMDVLKDSGFFSSKPVGFPME 566

Query: 200 VDWQ-AYDDNFPLLDDAXXXXXXXXXXXXXDFTRPGITHAVHHLSEFMQQPTLNHWNAAL 376
            + +   +D+ PLL +                TRP + +AV  LS+FM  P   H  AA 
Sbjct: 567 SNLKLTANDSSPLLSNPASYRRLIGRLLYLTITRPDLAYAVQALSQFMSNPHSTHLQAAE 626

Query: 377 YIVKYLKGT 403
            +++Y+K T
Sbjct: 627 RVLRYIKAT 635


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
 Frame = +2

Query: 14   IIHVKEFLHHEFTIKDLGIAKYFLSIQIARLLQACIFLKQS--TSHIIQDLKMENSYAIA 187
            +   K +L   F +KDLG+ KYFL I+++R  Q   +L Q      II ++ +  +   A
Sbjct: 806  VAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQG-FYLSQRKYVLDIISEMGLLGARPSA 864

Query: 188  TPLQVDWQAYDDNFPLLDDAXXXXXXXXXXXXXDFTRPGITHAVHHLSEFMQQPTLNHWN 367
             PL+ + +      PLL D+               TRP ++++VH L++FMQ P  +HWN
Sbjct: 865  FPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWN 924

Query: 368  AALYIVKYLK 397
            AA+ +V+YLK
Sbjct: 925  AAIRVVRYLK 934


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = +2

Query: 26   KEFLHHEFTIKDLGIAKYFLSIQIARLLQACIFLKQS--TSHIIQDLKMENSYAIATPLQ 199
            K +L+  F +KDLG+ KYFL I++AR   A +FL Q   T  I+ +  +  +     P++
Sbjct: 1162 KAYLNDCFKMKDLGVLKYFLGIEVARS-SAGLFLCQRKYTLDIVSETGLLGAKPCGFPIE 1220

Query: 200  VDWQAYDDNFPLLDDAXXXXXXXXXXXXXDFTRPGITHAVHHLSEFMQQPTLNHWNAALY 379
             + +    N  LL +                TRP + ++VH +S+FMQ+P + HW AAL 
Sbjct: 1221 QNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEAALR 1280

Query: 380  IVKYLKGT 403
            +V+YLKGT
Sbjct: 1281 VVRYLKGT 1288