BLASTX nr result

ID: Lithospermum22_contig00040114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040114
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   342   3e-92
ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   329   1e-88
ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   329   1e-88
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   329   1e-88
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...   329   2e-88

>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
           vinifera]
          Length = 1147

 Score =  342 bits (876), Expect = 3e-92
 Identities = 163/180 (90%), Positives = 176/180 (97%)
 Frame = +2

Query: 2   FRKNFYIEVKEIARMTPDEVSSYRKQLELKIHGKDVPKPVKTWHQTGLSTKILDTIRKLN 181
           FRKNFYIEVKE ARMTP+E+++YRKQLELKIHGKDVPKPVKTWHQTGL+TKILDTI+KLN
Sbjct: 459 FRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKKLN 518

Query: 182 FEKPTQIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPVGLIM 361
           +E+P  IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPP+MPGDGP+GLIM
Sbjct: 519 YERPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIM 578

Query: 362 APTRELVQQIHSDIKKFAKVVGLSCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILC 541
           APTRELVQQIHSDIKKFAKVVG+SCVPVYGGSGVAQQIS+LKRG E+VVCTPGRMIDILC
Sbjct: 579 APTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKRGAEVVVCTPGRMIDILC 638


>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           42-like [Cucumis sativus]
          Length = 1098

 Score =  329 bits (844), Expect = 1e-88
 Identities = 158/180 (87%), Positives = 174/180 (96%)
 Frame = +2

Query: 2   FRKNFYIEVKEIARMTPDEVSSYRKQLELKIHGKDVPKPVKTWHQTGLSTKILDTIRKLN 181
           FRKNFYIEVKEI+RMT +EV++YRKQLELKIHGKDVPKPVKTWHQTGL++KIL+TI+KLN
Sbjct: 432 FRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLN 491

Query: 182 FEKPTQIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPVGLIM 361
           +EKP  IQAQALPI+MSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ P++PGDGP+GLIM
Sbjct: 492 YEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIM 551

Query: 362 APTRELVQQIHSDIKKFAKVVGLSCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILC 541
           APTRELVQQIHSDIKKF+KV+GL CVPVYGGSGVAQQIS+LKRG EIVVCTPGRMIDILC
Sbjct: 552 APTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILC 611


>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
           [Cucumis sativus]
          Length = 1040

 Score =  329 bits (844), Expect = 1e-88
 Identities = 158/180 (87%), Positives = 174/180 (96%)
 Frame = +2

Query: 2   FRKNFYIEVKEIARMTPDEVSSYRKQLELKIHGKDVPKPVKTWHQTGLSTKILDTIRKLN 181
           FRKNFYIEVKEI+RMT +EV++YRKQLELKIHGKDVPKPVKTWHQTGL++KIL+TI+KLN
Sbjct: 354 FRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLN 413

Query: 182 FEKPTQIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPVGLIM 361
           +EKP  IQAQALPI+MSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ P++PGDGP+GLIM
Sbjct: 414 YEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIM 473

Query: 362 APTRELVQQIHSDIKKFAKVVGLSCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILC 541
           APTRELVQQIHSDIKKF+KV+GL CVPVYGGSGVAQQIS+LKRG EIVVCTPGRMIDILC
Sbjct: 474 APTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILC 533


>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
           [Cucumis sativus]
          Length = 1118

 Score =  329 bits (844), Expect = 1e-88
 Identities = 158/180 (87%), Positives = 174/180 (96%)
 Frame = +2

Query: 2   FRKNFYIEVKEIARMTPDEVSSYRKQLELKIHGKDVPKPVKTWHQTGLSTKILDTIRKLN 181
           FRKNFYIEVKEI+RMT +EV++YRKQLELKIHGKDVPKPVKTWHQTGL++KIL+TI+KLN
Sbjct: 432 FRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLN 491

Query: 182 FEKPTQIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPVGLIM 361
           +EKP  IQAQALPI+MSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ P++PGDGP+GLIM
Sbjct: 492 YEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIM 551

Query: 362 APTRELVQQIHSDIKKFAKVVGLSCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILC 541
           APTRELVQQIHSDIKKF+KV+GL CVPVYGGSGVAQQIS+LKRG EIVVCTPGRMIDILC
Sbjct: 552 APTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILC 611


>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1173

 Score =  329 bits (843), Expect = 2e-88
 Identities = 159/180 (88%), Positives = 173/180 (96%)
 Frame = +2

Query: 2    FRKNFYIEVKEIARMTPDEVSSYRKQLELKIHGKDVPKPVKTWHQTGLSTKILDTIRKLN 181
            FRKNFYIEVKEI+RM P+EV++YRKQLELKIHGKDVPKPVKTWHQTGL++KIL+TI+KLN
Sbjct: 487  FRKNFYIEVKEISRMAPEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLASKILETIKKLN 546

Query: 182  FEKPTQIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPVGLIM 361
            +EKP  IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP +  GDGP+GLIM
Sbjct: 547  YEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPLVEAGDGPIGLIM 606

Query: 362  APTRELVQQIHSDIKKFAKVVGLSCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILC 541
            APTRELVQQIHSDIKKFAKV+G+ CVPVYGGSGVAQQIS+LKRGTEIVVCTPGRMIDILC
Sbjct: 607  APTRELVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILC 666


Top