BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040027
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    80   2e-13
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    77   1e-12
ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [S...    76   3e-12
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi...    74   9e-12
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    73   2e-11

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
 Frame = -2

Query: 365  EEDFLKQQSGIKWLQEGDRNTAFYHNFVRKKRKKSAILRILAD-GNWLEAPDDITQSGVE 189
            +E +  Q+S + WL+ GD+N++F+H    ++R+ + I+R+  D GNWL++  D+    ++
Sbjct: 941  DEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLD 1000

Query: 188  FFEKLFTQDLADADHELIDCIPSLVSAEDNKMLMASPQLEDVRQVVFSLNKDSIAGSDGF 9
            +F  L+  +      E++D + + V+AE NK+L +   L +V++ VF L      G DGF
Sbjct: 1001 YFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPDGF 1060

Query: 8    NG 3
            +G
Sbjct: 1061 SG 1062


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -2

Query: 368 MEEDFLKQQSGIKWLQEGDRNTAFYHNFVRKKRKKSAILRILADGNWLEAPDD--ITQSG 195
           +EE F KQ+S + WL  GDRNT ++H   R +R ++  L ++ D N +   ++  I+Q  
Sbjct: 226 LEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNR-LTVMEDINGVAQHEEHQISQII 284

Query: 194 VEFFEKLFTQDLADADHELID-CIPSLVSAEDNKMLMASPQLEDVRQVVFSLNKDSIAGS 18
             +F+++FT + +D D  ++D  I  +VS  DN  L   P  E+V+  VFS+N     G 
Sbjct: 285 SGYFQQIFTSE-SDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGP 343

Query: 17  DGF 9
           DGF
Sbjct: 344 DGF 346


>ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [Sorghum bicolor]
           gi|241929646|gb|EES02791.1| hypothetical protein
           SORBIDRAFT_03g011415 [Sorghum bicolor]
          Length = 335

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
 Frame = -2

Query: 374 LAMEEDFLKQQSGIKWLQEGDRNTAFYHNFVRKKRKKSAILRILADGNWLEAPDDITQSG 195
           L  EE    Q+S   WL++GDRNT+F+HNF  K+RKK+ I + L D N     ++I    
Sbjct: 57  LEQEEIHWFQRSRANWLRQGDRNTSFFHNFATKRRKKNTI-KGLMDENGQRQENEIAMRN 115

Query: 194 V--EFFEKLFTQDLADADHELIDCIPSLVSAEDNKMLMASPQLEDVRQVVFSLNKDSIAG 21
           +   +FE +FT ++ D D  ++  +   V+ + N +LM +   E+V++ +F +      G
Sbjct: 116 IIQNYFENIFTSEVGDPDPSVLADVSRSVTPDMNSVLMDTFTAEEVKKALFQIGDFKALG 175

Query: 20  SDGFN 6
            DG +
Sbjct: 176 PDGMH 180


>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
          Length = 995

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = -2

Query: 365 EEDFLKQQSGIKWLQEGDRNTAFYHNFVRKKRKKSAI-LRILADGNWLEAPDDITQSGVE 189
           EE   KQ+S I+WL+EGDRNT+F+H     +R+ + I L +  DG+       I      
Sbjct: 72  EEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCSESQGIKLMAEH 131

Query: 188 FFEKLFTQDLADADHELIDCIPSLVSAEDNKMLMASPQLEDVRQVVFSLNKDSIAGSDGF 9
           FFEKLFT +  ++  E+++ IP  V    N+ L  +   E++++ +F +        DGF
Sbjct: 132 FFEKLFTSEQCESVEEVLEAIPCKVDESINEELCKAYSDEEIKEALFQMGPTKAPSPDGF 191


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
 Frame = -2

Query: 404 QQAKAFHLRSLAMEED-FLKQQSGIKWLQEGDRNTAFYHNFVRKKRKKSAILRILA-DGN 231
           ++   + L  L  + D + KQ++   WL +GDRNT+F+H    ++R+++ I ++   DG+
Sbjct: 574 EEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGS 633

Query: 230 WLEAPDDITQSGVEFFEKLFTQDLADADHELIDCIPSLVSAEDNKMLMASPQLEDVRQVV 51
           W+E  +D     +EFF++LFT +      +L+D +   VS   N+ L A    E+V++ +
Sbjct: 634 WVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEAL 693

Query: 50  FSLNKDSIAGSDG 12
            ++      G DG
Sbjct: 694 DAIGDLKAPGPDG 706