BLASTX nr result

ID: Lithospermum22_contig00040008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040008
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...    57   1e-06
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...    56   4e-06
ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...    56   4e-06
gb|AAN60309.1| unknown [Arabidopsis thaliana]                          56   4e-06

>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|297740899|emb|CBI31081.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -1

Query: 151 SQLPRKLFLAAGITALCFILFRQTGFNSTSQYFSRKEPGITHVLVTGGAG 2
           S +  K+ LAA +TALC ++ +Q+   +T   FSR EPG+THVLVTGGAG
Sbjct: 31  SNVVGKILLAATLTALCILMLKQSSNFNTPSPFSRHEPGVTHVLVTGGAG 80


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 KLFLAAGITALCFILFRQTGFNSTSQYFSRKEPGITHVLVTGGAG 2
           K+ L A +TALC  + +Q+   +T   FSR EPG+THVLVTGGAG
Sbjct: 36  KILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAG 80


>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 KLFLAAGITALCFILFRQTGFNSTSQYFSRKEPGITHVLVTGGAG 2
           K+ L A +TALC  + +Q+   +T   FSR EPG+THVLVTGGAG
Sbjct: 36  KILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAG 80


>gb|AAN60309.1| unknown [Arabidopsis thaliana]
          Length = 419

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 KLFLAAGITALCFILFRQTGFNSTSQYFSRKEPGITHVLVTGGAG 2
           K+ L A +TALC  + +Q+   +T   FSR EPG+THVLVTGGAG
Sbjct: 36  KILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAG 80


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