BLASTX nr result

ID: Lithospermum22_contig00039984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039984
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM12540.1| YA2 [Antirrhinum majus]                               110   3e-22
ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...   105   8e-21
emb|CBI27842.3| unnamed protein product [Vitis vinifera]              105   8e-21
gb|ACN40089.1| unknown [Picea sitchensis]                             102   9e-20
gb|AAS78477.1| CCAAT-box transcription factor complex WHAP3 [Tri...   100   2e-19

>emb|CAM12540.1| YA2 [Antirrhinum majus]
          Length = 304

 Score =  110 bits (274), Expect = 3e-22
 Identities = 70/193 (36%), Positives = 103/193 (53%)
 Frame = +2

Query: 113 TMSVTKDEKMKQADADHNQTKSFTHKFLNCSSLSNSGEQQKHSLSKTVASDHSFGSVSRT 292
           ++S T   +++ A   H   K     +    S S    +Q HS + T+A         R+
Sbjct: 25  SLSKTVTTELETAAESHFHLKDSDFPYQEPDSSSTLSTEQSHSEATTLA---------RS 75

Query: 293 KSCKQNIVSESGDNSEYLRDTEGCWTSLPPSGTANNPLHQGLLDLNKSMASKSYPWTESY 472
               QNI  + G    + ++ E       P G+A+   H   L+ N+S A  SYP   SY
Sbjct: 76  NLNMQNISFQPGFYGTHKKNGEDSVKLGMPFGSADYMSHHIQLEHNQSPACMSYPPAASY 135

Query: 473 LGGFISACTQNSVMYPQMVMTEPARIPLPIQFTGNFPVYVNAKQYHAIIKRRKIRSKVEA 652
            GG I++   NS++YPQMV     R  LP+  T   P+YVNAKQYHAI++RR+ R+K+EA
Sbjct: 136 FGGIIASYGPNSIVYPQMVGIAQERGVLPLDCTEG-PIYVNAKQYHAILRRRQTRAKLEA 194

Query: 653 QNELCKSKKPYLH 691
           ++++ KSKKPYLH
Sbjct: 195 RSKMAKSKKPYLH 207


>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
           vinifera]
          Length = 350

 Score =  105 bits (262), Expect = 8e-21
 Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
 Frame = +2

Query: 224 EQQKHSLSKTVASDHSFGSVSRTKSCKQNIVSESGDNSEYLRDTEGCWTSLPPSGTANNP 403
           +Q   S   T  S     ++ RT S  Q I SES       +  EG     P    AN  
Sbjct: 70  DQDSSSSQSTGQSHQEVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPVFFMANPD 129

Query: 404 L--HQGLLDLNKSMASKSYPWTESYLGGFISACTQNSVMYPQMVMTEPARIPLPIQFTGN 577
           +  +   +D   S+   +YP+ + Y GG ++A   ++V+ PQ+V   P R+PLP     +
Sbjct: 130 VVFNPSQVDYGHSVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDIAED 189

Query: 578 FPVYVNAKQYHAIIKRRKIRSKVEAQNELCKSKKPYLH 691
            P++VNAKQYH I++RR+ R+K+EAQN+L K++KPYLH
Sbjct: 190 GPIFVNAKQYHGILRRRQSRAKMEAQNKLVKARKPYLH 227


>emb|CBI27842.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  105 bits (262), Expect = 8e-21
 Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
 Frame = +2

Query: 224 EQQKHSLSKTVASDHSFGSVSRTKSCKQNIVSESGDNSEYLRDTEGCWTSLPPSGTANNP 403
           +Q   S   T  S     ++ RT S  Q I SES       +  EG     P    AN  
Sbjct: 50  DQDSSSSQSTGQSHQEVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPVFFMANPD 109

Query: 404 L--HQGLLDLNKSMASKSYPWTESYLGGFISACTQNSVMYPQMVMTEPARIPLPIQFTGN 577
           +  +   +D   S+   +YP+ + Y GG ++A   ++V+ PQ+V   P R+PLP     +
Sbjct: 110 VVFNPSQVDYGHSVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDIAED 169

Query: 578 FPVYVNAKQYHAIIKRRKIRSKVEAQNELCKSKKPYLH 691
            P++VNAKQYH I++RR+ R+K+EAQN+L K++KPYLH
Sbjct: 170 GPIFVNAKQYHGILRRRQSRAKMEAQNKLVKARKPYLH 207


>gb|ACN40089.1| unknown [Picea sitchensis]
          Length = 369

 Score =  102 bits (253), Expect = 9e-20
 Identities = 43/91 (47%), Positives = 67/91 (73%)
 Frame = +2

Query: 419 LDLNKSMASKSYPWTESYLGGFISACTQNSVMYPQMVMTEPARIPLPIQFTGNFPVYVNA 598
           L+ N S+A  +YP+ E Y GG ++A    ++++P M+  + AR+PLP+  T   PVYVNA
Sbjct: 135 LEFNHSIACAAYPYAEPYFGGILAAYPAQAMIHPNMLGVQQARMPLPLDMTEEEPVYVNA 194

Query: 599 KQYHAIIKRRKIRSKVEAQNELCKSKKPYLH 691
           KQYH I++RR++R+K E++N+L K++KPYLH
Sbjct: 195 KQYHGILRRRQLRAKAESENKLIKTRKPYLH 225


>gb|AAS78477.1| CCAAT-box transcription factor complex WHAP3 [Triticum aestivum]
          Length = 244

 Score =  100 bits (250), Expect = 2e-19
 Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
 Frame = +2

Query: 221 GEQQKHSLSKTVASDHSFGSVSRTKSCKQNIVSESGDNSEYLRDTEGCWTSLPPSGTANN 400
           G+Q  +  S    S      +S     +QN   +SG+   Y +  EG   S    G +  
Sbjct: 18  GQQVPNCESSASDSPQEVSGMSEGSFNEQN--DQSGNRDGYTKSDEGKMMSALSLGNSET 75

Query: 401 PLHQGLLDLNKSMASKSYPWTESYLGGFISACTQNSVMYPQMV-MTEPARIPLPIQ-FTG 574
                  D     A  SYP+ + Y GG ++A   +++M+PQMV M   +R+PLPI+    
Sbjct: 76  AYTPPKPDRTHPFAI-SYPYADPYYGGAVAAYGTHAIMHPQMVGMVPSSRVPLPIEPAAA 134

Query: 575 NFPVYVNAKQYHAIIKRRKIRSKVEAQNELCKSKKPYLH 691
             P+YVNAKQYHAI++RR++R+K+EA+N+L KS+KPYLH
Sbjct: 135 EEPIYVNAKQYHAILRRRQLRAKLEAENKLVKSRKPYLH 173


Top