BLASTX nr result

ID: Lithospermum22_contig00039981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039981
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vit...    79   4e-13
ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...    79   5e-13
ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like...    66   3e-09

>ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vitis vinifera]
           gi|296086533|emb|CBI32122.3| unnamed protein product
           [Vitis vinifera]
          Length = 878

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
 Frame = +2

Query: 2   KSGTDVLLDLLSIETPP-SQITPSTPEILSSNQENKRTINVLDTLSSPSA---QVASPAG 169
           K+GTDVLLDLLSI TPP +Q + STP+ILSS+Q+NK     L+ LSSPS+   Q +SPAG
Sbjct: 676 KAGTDVLLDLLSIGTPPPAQSSLSTPDILSSSQDNKMPAPTLERLSSPSSISIQASSPAG 735

Query: 170 SSSIMDLLDDFGP 208
           ++ +MDLLD F P
Sbjct: 736 AAPMMDLLDGFAP 748


>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
           gi|223539863|gb|EEF41443.1| AP-1 complex subunit
           gamma-2, putative [Ricinus communis]
          Length = 875

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
 Frame = +2

Query: 2   KSGTDVLLDLLSIETPPSQITPSTPEILSSNQENKRTINVLDTLSS--PSAQVASPAGSS 175
           K+GT++LLDLLSI TPP Q + ST ++L S Q+N+  I  LD LSS  PSAQV S  G+S
Sbjct: 675 KAGTNILLDLLSIGTPPVQSSSSTSDLLLSGQDNQTPITTLDALSSPFPSAQVKSSVGAS 734

Query: 176 SIMDLLDDFGP 208
            +MDLLD FGP
Sbjct: 735 PMMDLLDGFGP 745


>ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|222855073|gb|EEE92620.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/72 (58%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2   KSGTDVLLDLLSIETPPSQITPSTPEILSSNQENKRTINVLDTL---SSPSAQVASPAGS 172
           K+GTDVLLDLLSI  PP Q + ST +ILS  Q  K  I  LD L   SSPSAQ  S A +
Sbjct: 676 KAGTDVLLDLLSIGVPPVQSSSSTTDILSPIQNEKSPIATLDALSSSSSPSAQATSSARA 735

Query: 173 SSIMDLLDDFGP 208
           + +MDLLD FGP
Sbjct: 736 APMMDLLDGFGP 747


>ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|222868163|gb|EEF05294.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2   KSGTDVLLDLLSIETPPSQITPSTPEILSSNQENKRTINVLDTLSSP---SAQVASPAGS 172
           K+GTDVLLDLLSI TP    +P+T +ILSS+Q +K  I  LD LSSP   SAQ  S A +
Sbjct: 673 KAGTDVLLDLLSIGTPVQSSSPTT-DILSSSQNDKSPIATLDALSSPSSLSAQATSSARA 731

Query: 173 SSIMDLLDDFGP 208
           + +MDLLD FGP
Sbjct: 732 APMMDLLDGFGP 743


>ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 2 [Glycine
           max]
          Length = 896

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +2

Query: 2   KSGTDVLLDLLSIETPPSQITPSTPEILSSNQENKRTINVLDTLSSPSAQVASPAGSSSI 181
           KSG DVLLDLLSI +P  + + ST +ILSSN  NK  ++ LD LSS S    + + ++ +
Sbjct: 676 KSGNDVLLDLLSIGSPSVESSSSTVDILSSNSSNKAPVSSLDGLSSLSLSTKTTSNAAPM 735

Query: 182 MDLLDDFGP 208
           MDLLD F P
Sbjct: 736 MDLLDGFAP 744


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