BLASTX nr result

ID: Lithospermum22_contig00039946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039946
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...    87   1e-15
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...    86   3e-15
ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, p...    85   7e-15
emb|CBI18267.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...    80   1e-13

>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/63 (71%), Positives = 53/63 (84%)
 Frame = +3

Query: 3    MQDPVTDIHKEGNYLLLAVQEVVCLAGGQCEGRFVFGRQSRRLKESNHSYRFTRDGTNLK 182
            +QDP  DIHKEG YLLLAVQE+V  +G QCEGRFVFGR+S++ KES+ S RFT+DGTN K
Sbjct: 975  LQDPTLDIHKEGKYLLLAVQELV--SGDQCEGRFVFGRESKKPKESSES-RFTKDGTNPK 1031

Query: 183  SLL 191
            SLL
Sbjct: 1032 SLL 1034


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +3

Query: 3    MQDPVTDIHKEGNYLLLAVQEVVCLAGGQCEGRFVFGRQSRRLKESNHSYRFTRDGTNLK 182
            ++DP  DIHKEG YL+LAVQE+V  +G QCEGRFVFGR+SR+ K SN   +FT+DGTN K
Sbjct: 1006 LEDPSIDIHKEGKYLMLAVQELV--SGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPK 1063

Query: 183  SLL 191
            SLL
Sbjct: 1064 SLL 1066


>ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, partial [Medicago
           truncatula] gi|355504187|gb|AES85390.1| ATP-dependent
           RNA helicase A-like protein, partial [Medicago
           truncatula]
          Length = 333

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   MQDPVTDIHKEGNYLLLAVQEVVCLAGGQCEGRFVFGRQSRRLKESNHSYRFTRDGTNLK 182
           ++DP  DIHKEG YL+LAVQE+V  +G QCEGRFVFGR SR+ K SN   +FT+DGTN K
Sbjct: 177 LEDPGIDIHKEGKYLMLAVQELV--SGDQCEGRFVFGRDSRKPKASNDENKFTKDGTNPK 234

Query: 183 SLL 191
           SLL
Sbjct: 235 SLL 237


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/63 (61%), Positives = 50/63 (79%)
 Frame = +3

Query: 3    MQDPVTDIHKEGNYLLLAVQEVVCLAGGQCEGRFVFGRQSRRLKESNHSYRFTRDGTNLK 182
            +Q+P  DIHKEG YL+L +QE+V  +G QCEGRFVFGR+S++ +E   S RFT+DGTN K
Sbjct: 981  LQNPSLDIHKEGKYLMLGIQELV--SGDQCEGRFVFGRESKKPREPCDSNRFTKDGTNPK 1038

Query: 183  SLL 191
            SLL
Sbjct: 1039 SLL 1041


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/63 (61%), Positives = 50/63 (79%)
 Frame = +3

Query: 3    MQDPVTDIHKEGNYLLLAVQEVVCLAGGQCEGRFVFGRQSRRLKESNHSYRFTRDGTNLK 182
            +Q+P  DIHKEG YL+L +QE+V  +G QCEGRFVFGR+S++ +E   S RFT+DGTN K
Sbjct: 981  LQNPSLDIHKEGKYLMLGIQELV--SGDQCEGRFVFGRESKKPREPCDSNRFTKDGTNPK 1038

Query: 183  SLL 191
            SLL
Sbjct: 1039 SLL 1041


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