BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039922
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   167   6e-40
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   167   1e-39
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/115 (64%), Positives = 96/115 (83%)
 Frame = +3

Query: 6   GWFDKVIELFRDMDEFELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           G ++K + LFR+M E +LYSFG+V+RACAGLAA+ PGKE+HCQY+++ GWRDVIVESAL+
Sbjct: 344 GDYEKAVNLFREMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALV 403

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           DLYAKCG +++AY +F +M  +NLITWNSMI GFAQNG  G A+Q+F  MIK+ I
Sbjct: 404 DLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGI 458



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 33/97 (34%), Positives = 64/97 (65%)
 Frame = +3

Query: 60  YSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALIDLYAKCGSVDYAYGIFTK 239
           Y+FGSVL AC  L  L+ G+E+H + +      +V+ ES+L+D+Y KCG+V+ +  +F +
Sbjct: 265 YTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDR 324

Query: 240 MRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           M  +N ++W+++++ +  NG   +A+ +F +M + D+
Sbjct: 325 MSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDL 361



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +3

Query: 66  FGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALIDLYAKCGSVDY-AYGIFTKM 242
           + S+L+ C  + +   G++ H   VK     D  V ++L+ LY K GS       +F  +
Sbjct: 63  YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGL 122

Query: 243 RIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
            +K++++W SMI+G+ + G+ G A+++F  M+   I
Sbjct: 123 FVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGI 158


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  167 bits (424), Expect = 6e-40
 Identities = 74/115 (64%), Positives = 97/115 (84%)
 Frame = +3

Query: 6   GWFDKVIELFRDMDEFELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           G F  VI++FR M++ +LY FG++LR CAGLAA++ GKE+HCQY+++ GWRDVIVESAL+
Sbjct: 343 GDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALV 402

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           DLYAKCG ++YA  IF +M ++NLITWNSMI GFAQNGRG EAL++F QM+K+ I
Sbjct: 403 DLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 457



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
 Frame = +3

Query: 9   WFDKVIELFRDMDEF-----ELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVE 173
           +FD+ +  F  M        + ++FG+VL AC  L  LK GKE+H + +      +V+VE
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 301

Query: 174 SALIDLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           S+L+D+Y KCGSV  +  IF +M IKN ++W++++ G+ QNG     +Q+F +M K D+
Sbjct: 302 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 360


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  167 bits (424), Expect = 6e-40
 Identities = 74/115 (64%), Positives = 97/115 (84%)
 Frame = +3

Query: 6   GWFDKVIELFRDMDEFELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           G F  VI++FR M++ +LY FG++LR CAGLAA++ GKE+HCQY+++ GWRDVIVESAL+
Sbjct: 402 GDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALV 461

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           DLYAKCG ++YA  IF +M ++NLITWNSMI GFAQNGRG EAL++F QM+K+ I
Sbjct: 462 DLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 516



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
 Frame = +3

Query: 9   WFDKVIELFRDMDEF-----ELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVE 173
           +FD+ +  F  M        + ++FG+VL AC  L  LK GKE+H + +      +V+VE
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 360

Query: 174 SALIDLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           S+L+D+Y KCGSV  +  IF +M IKN ++W++++ G+ QNG     +Q+F +M K D+
Sbjct: 361 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 419


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/114 (67%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GWFDKVIELFRDMDEFE-LYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESAL 182
           G F+ VI +FR+M E + LYSFG+VLRACAGLAA++ GKE+HCQYV+R GWRDVI+ESAL
Sbjct: 335 GDFESVIRIFREMGEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESAL 394

Query: 183 IDLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKD 344
           +DLYAKCG +D+A+ IFTKM ++NLITWNSMI GFAQNG   EAL++F +M+K+
Sbjct: 395 VDLYAKCGCIDFAHRIFTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKE 448



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/96 (39%), Positives = 64/96 (66%)
 Frame = +3

Query: 60  YSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALIDLYAKCGSVDYAYGIFTK 239
           ++FG+VL AC  L  LK GKE+H + +      +V+VES+L+D+Y KCG VD +  +F +
Sbjct: 256 FTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFDR 315

Query: 240 MRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDD 347
           M +KN ++W++++ GF QNG     +++F +M + D
Sbjct: 316 MSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEAD 351



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = +3

Query: 18  KVIELFRDMDEFEL----YSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           K ++LF +M +  +    ++  +V++AC  L  L  GK  HC  + R    + ++ SALI
Sbjct: 136 KALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALI 195

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQM 335
           DLY +   +D A  +F ++   + I W S+IS + +N    +AL  F  M
Sbjct: 196 DLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLM 245


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/115 (65%), Positives = 95/115 (82%)
 Frame = +3

Query: 6   GWFDKVIELFRDMDEFELYSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           G F+ VI +FR+  + + YSFG+VLRACAGLAA++ GKE+HCQYVKR  WRDV+ ESAL+
Sbjct: 344 GDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALV 403

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDDI 350
           DLYAKCG +D+AY IF +M ++NLITWNSMI GFAQNGRGGE  Q+F +MI++ I
Sbjct: 404 DLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGI 458



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/96 (37%), Positives = 61/96 (63%)
 Frame = +3

Query: 60  YSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALIDLYAKCGSVDYAYGIFTK 239
           ++FG+VL AC  L  LK GKE+H + +      +V VES+L+D+Y KC  V+ +  +F +
Sbjct: 265 FTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDR 324

Query: 240 MRIKNLITWNSMISGFAQNGRGGEALQVFVQMIKDD 347
           M +KNL++W +++ G+ QNG     +++F +  K D
Sbjct: 325 MSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKVD 360



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
 Frame = +3

Query: 18  KVIELFRDMDEFEL----YSFGSVLRACAGLAALKPGKEMHCQYVKRSGWRDVIVESALI 185
           K +ELF +M    +    ++  +V++AC+GL  L+ GK  H   + R    + ++ +ALI
Sbjct: 145 KSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALI 204

Query: 186 DLYAKCGSVDYAYGIFTKMRIKNLITWNSMISGFAQNGRGGEALQVFVQMIK 341
           D+Y +  +VD A  +F ++   + I W S+IS F +N    +AL  F  M +
Sbjct: 205 DMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCR 256