BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039902
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              256   2e-66
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   256   2e-66
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   254   9e-66
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   241   1e-61
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   239   4e-61

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  256 bits (654), Expect = 2e-66
 Identities = 115/210 (54%), Positives = 160/210 (76%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFSTPFFKSYRNRDDPFLWNS 182
           IH+RLI T  + N    T++ILN  SS H   ++FARYLF S  F + +R +D+PFLWN+
Sbjct: 33  IHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNA 92

Query: 183 IIKTFSHGSDPESSFEVFVLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLVKCD 362
           IIK+FSHG DP  +F +F LMLE GV VD +SFSL+LKACSR+G++  G+Q+HGLL + +
Sbjct: 93  IIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRME 152

Query: 363 FGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIFE 542
            G ++F+QNCL+C+Y++ GC+ + RQ+FD M++RDSVS+N MIDGYVK   V  ARE+F+
Sbjct: 153 IGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFD 212

Query: 543 VMPNEMRNLITWNAMIGGYVKVEDGFKLAW 632
           VMP E +NLI+WN+MI GY + E+G ++AW
Sbjct: 213 VMPMEQKNLISWNSMISGYARSEEGLRVAW 242



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +3

Query: 162 DPFLWNSIIKTFSHGSDPESSFEVF-VLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQV 338
           D   +NS+I  +      +S+ E+F V+ +E   L+   S++ M+   +R      G++V
Sbjct: 187 DSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLI---SWNSMISGYARS---EEGLRV 240

Query: 339 HGLLVKCDFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRV 518
              L +     +L   N +I   VK G +E    +F+ M +RD VS+  M+DGY K   +
Sbjct: 241 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEI 300

Query: 519 DLAREIFEVMPNEMRNLITWNAMIGGYVK 605
           D+AR +F+ MP   R++I+ NAM+ GYV+
Sbjct: 301 DIARGLFDEMPE--RDVISCNAMMAGYVQ 327


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  256 bits (654), Expect = 2e-66
 Identities = 115/210 (54%), Positives = 160/210 (76%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFSTPFFKSYRNRDDPFLWNS 182
           IH+RLI T  + N    T++ILN  SS H   ++FARYLF S  F + +R +D+PFLWN+
Sbjct: 33  IHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNA 92

Query: 183 IIKTFSHGSDPESSFEVFVLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLVKCD 362
           IIK+FSHG DP  +F +F LMLE GV VD +SFSL+LKACSR+G++  G+Q+HGLL + +
Sbjct: 93  IIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRME 152

Query: 363 FGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIFE 542
            G ++F+QNCL+C+Y++ GC+ + RQ+FD M++RDSVS+N MIDGYVK   V  ARE+F+
Sbjct: 153 IGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFD 212

Query: 543 VMPNEMRNLITWNAMIGGYVKVEDGFKLAW 632
           VMP E +NLI+WN+MI GY + E+G ++AW
Sbjct: 213 VMPMEQKNLISWNSMISGYARSEEGLRVAW 242



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +3

Query: 162 DPFLWNSIIKTFSHGSDPESSFEVF-VLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQV 338
           D   +NS+I  +      +S+ E+F V+ +E   L+   S++ M+   +R      G++V
Sbjct: 187 DSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLI---SWNSMISGYARS---EEGLRV 240

Query: 339 HGLLVKCDFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRV 518
              L +     +L   N +I   VK G +E    +F+ M +RD VS+  M+DGY K   +
Sbjct: 241 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEI 300

Query: 519 DLAREIFEVMPNEMRNLITWNAMIGGYVK 605
           D+AR +F+ MP   R++I+ NAM+ GYV+
Sbjct: 301 DIARGLFDEMPE--RDVISCNAMMAGYVQ 327


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  254 bits (649), Expect = 9e-66
 Identities = 115/210 (54%), Positives = 158/210 (75%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFSTPFFKSYRNRDDPFLWNS 182
           IH+RLI T  + N    T++ILN  SS H   ++FARYLF S  F + +R +D+PFLWN+
Sbjct: 89  IHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNA 148

Query: 183 IIKTFSHGSDPESSFEVFVLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLVKCD 362
           IIK+FSHG DP  +F +F LMLE GV VD +SFSL+LKACSR+G++  G+Q+HGLL   +
Sbjct: 149 IIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGXME 208

Query: 363 FGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIFE 542
            G ++F+QNCL+C+Y++ GC+ + RQ+FD M+ RDSVS+N MIDGYVK   V  ARE+F+
Sbjct: 209 IGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFD 268

Query: 543 VMPNEMRNLITWNAMIGGYVKVEDGFKLAW 632
           VMP E +NLI+WN+MI GY + E+G ++AW
Sbjct: 269 VMPMEQKNLISWNSMISGYARSEEGLRVAW 298



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +3

Query: 162 DPFLWNSIIKTFSHGSDPESSFEVF-VLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQV 338
           D   +NS+I  +      +S+ E+F V+ +E   L+   S++ M+   +R      G++V
Sbjct: 243 DSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLI---SWNSMISGYARS---EEGLRV 296

Query: 339 HGLLVKCDFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRV 518
              L +     +L   N +I   VK G +E    +F+ M +RD VS+  M+DGY K   +
Sbjct: 297 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEI 356

Query: 519 DLAREIFEVMPNEMRNLITWNAMIGGYVK 605
           D+AR +F+ MP   R++I+ NAM+ GYV+
Sbjct: 357 DIARGLFDEMPE--RDVISCNAMMAGYVQ 383


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  241 bits (614), Expect = 1e-61
 Identities = 111/211 (52%), Positives = 158/211 (74%), Gaps = 1/211 (0%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFST-PFFKSYRNRDDPFLWN 179
           +HAR+I T  ++N    TK+IL+L SSP+V   +FARY FF+   +    + ++DPFLWN
Sbjct: 34  VHARMITTGFIKNTSLTTKIILSLSSSPNVALHEFARYFFFTRHAYIIGAQEKEDPFLWN 93

Query: 180 SIIKTFSHGSDPESSFEVFVLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLVKC 359
           ++IKT SHG+DP+ +  +F LML+ GV VD +S SL+LKACSR+G+V  G+Q+HGLL K 
Sbjct: 94  AVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQIHGLLRKL 153

Query: 360 DFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIF 539
            FG ++F+QNCLI +YVK  C++  RQVFD M  RDSVSYN MI GYVK   +DLAR+++
Sbjct: 154 KFGSDVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLY 213

Query: 540 EVMPNEMRNLITWNAMIGGYVKVEDGFKLAW 632
           +VMP   RNL++WN+++ GY++ ++GF+LAW
Sbjct: 214 DVMPINWRNLVSWNSLLSGYMRSDNGFELAW 244



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +3

Query: 372 NLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIFEVMP 551
           +L   N +I    K G +E  + +FD M ER  +S+  M+DGY K   VD+AR+ F+ MP
Sbjct: 254 DLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDNMP 313

Query: 552 NEMRNLITWNAMIGGYVK 605
           +  R+++  NAM+ GYV+
Sbjct: 314 D--RDVVACNAMMSGYVQ 329


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  239 bits (609), Expect = 4e-61
 Identities = 115/212 (54%), Positives = 156/212 (73%), Gaps = 3/212 (1%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFSTPFFKSYRNR---DDPFL 173
           +HAR+IKT  L+N    TK+ILN +SSPH   ++FARY+FF+    +  R     DDPFL
Sbjct: 33  VHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRNHLDDDPFL 92

Query: 174 WNSIIKTFSHGSDPESSFEVFVLMLEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLV 353
           WN++IK++SHG++P  +  +F +MLE G  VD +SFSL+LKAC+RV +V  G Q+HGLL+
Sbjct: 93  WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLM 152

Query: 354 KCDFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLARE 533
           K + G NLF+ NCLI MY++ G +E  RQVFD M  +DSVSYN MIDGYVKS  +DLARE
Sbjct: 153 KLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARE 212

Query: 534 IFEVMPNEMRNLITWNAMIGGYVKVEDGFKLA 629
           +F+ MP E +NLI+WN+M+GG+ + +DG  LA
Sbjct: 213 LFDSMPLEDKNLISWNSMLGGFAQTKDGIGLA 244



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   IHARLIKTKILENLLFATKLILNLLSSPHVLSIKFARYLFFSTPFFKSYRNRDDPFLWNS 182
           IH  L+K +I  NL     LI   L       I+FAR +F   P         D   +NS
Sbjct: 147 IHGLLMKLEIGSNLFLLNCLIAMYLRCG---DIEFARQVFDRMPI-------QDSVSYNS 196

Query: 183 IIKTFSHGSDPESSFEVFVLM-LEGGVLVDSYSFSLMLKACSRVGIVSRGIQVHGLLVKC 359
           +I  +      + + E+F  M LE   L+   S++ ML   ++      GI +   L + 
Sbjct: 197 MIDGYVKSGTIDLARELFDSMPLEDKNLI---SWNSMLGGFAQT---KDGIGLALELFEK 250

Query: 360 DFGGNLFVQNCLICMYVKSGCVELGRQVFDMMLERDSVSYNVMIDGYVKSQRVDLAREIF 539
               +L   N +I  + K G +E    +F+ M +RD +S++ MIDGY K   + +AR +F
Sbjct: 251 MPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLF 310

Query: 540 EVMPNEMRNLITWNAMIGGYVK 605
           + MP+  ++++ +N ++ GY +
Sbjct: 311 DEMPD--KDVVAFNTIMAGYAQ 330