BLASTX nr result

ID: Lithospermum22_contig00039819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039819
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 4...    94   1e-17
ref|XP_003531187.1| PREDICTED: U-box domain-containing protein 6...    91   1e-16
ref|XP_003524886.1| PREDICTED: U-box domain-containing protein 6...    91   1e-16
ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus ...    89   3e-16
ref|NP_173843.2| U-box domain-containing protein 6 [Arabidopsis ...    87   1e-15

>ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 45-like [Cucumis
           sativus] gi|449494446|ref|XP_004159548.1| PREDICTED:
           U-box domain-containing protein 45-like [Cucumis
           sativus]
          Length = 778

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = -2

Query: 196 MDVSEVEEHLKSLGEPKLHGGMCKTASAMYAKVLAIFPDVEATRPRSVSGIQALCTLHIA 17
           MD+SEVEE+L +  + KLH GMCKT SA+Y KVL+IFP +EA RPRS SGIQALC+LH+A
Sbjct: 1   MDISEVEENLFAASDAKLHRGMCKTLSALYCKVLSIFPSLEAARPRSKSGIQALCSLHVA 60

Query: 16  LEK 8
           LEK
Sbjct: 61  LEK 63


>ref|XP_003531187.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 766

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 199 VMDVSEVEEHLKSLGEPKLHGGMCKTASAMYAKVLAIFPDVEATRPRSVSGIQALCTLHI 20
           +MDV+EVEE+L +  + KLHG MCKT S +Y KVL++FP +EA RPRS SGIQALC+LH+
Sbjct: 1   MMDVAEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHV 60

Query: 19  ALEK 8
           ALEK
Sbjct: 61  ALEK 64


>ref|XP_003524886.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 764

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 199 VMDVSEVEEHLKSLGEPKLHGGMCKTASAMYAKVLAIFPDVEATRPRSVSGIQALCTLHI 20
           +MDV+EVEE+L +  + KLHG MCKT S +Y KVL++FP +EA RPRS SGIQALC+LH+
Sbjct: 1   MMDVAEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHV 60

Query: 19  ALEK 8
           ALEK
Sbjct: 61  ALEK 64


>ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223545995|gb|EEF47498.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 774

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = -2

Query: 196 MDVSEVEEHLKSLGEPKLHGGMCKTASAMYAKVLAIFPDVEATRPRSVSGIQALCTLHIA 17
           MD++EVEE+L +  + KLHG MCK  SA Y K+L+IFP +EA RPRS SGIQALC+LHIA
Sbjct: 1   MDITEVEENLFAASDAKLHGEMCKALSATYCKILSIFPSLEAARPRSKSGIQALCSLHIA 60

Query: 16  LEK 8
           LEK
Sbjct: 61  LEK 63


>ref|NP_173843.2| U-box domain-containing protein 6 [Arabidopsis thaliana]
           gi|172045563|sp|O48700.2|PUB6_ARATH RecName: Full=U-box
           domain-containing protein 6; AltName: Full=Plant U-box
           protein 6 gi|332192396|gb|AEE30517.1| U-box
           domain-containing protein 6 [Arabidopsis thaliana]
          Length = 771

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = -2

Query: 196 MDVSEVEEHLKSLGEPKLHGGMCKTASAMYAKVLAIFPDVEATRPRSVSGIQALCTLHIA 17
           MDVSE+EE+L +  + KLHG MCK  SA+Y KVL+IFP +E  RPRS SGIQ LC+LHIA
Sbjct: 1   MDVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIA 60

Query: 16  LEK 8
           LEK
Sbjct: 61  LEK 63


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