BLASTX nr result

ID: Lithospermum22_contig00039789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039789
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   121   7e-26
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   117   1e-24
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   117   1e-24
emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]   114   1e-23
emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]   112   3e-23

>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/107 (54%), Positives = 74/107 (69%)
 Frame = -2

Query: 332 VECYKCHKLGHFQYECPN*NKEANYAEIEGEDEELLLMAHTAEDEQEMMVMANTDEVQKA 153
           VECYKCHKLGHFQYECPN  + ANYAE+E E+EELLLMA+               E+  +
Sbjct: 221 VECYKCHKLGHFQYECPNWERTANYAELE-EEEELLLMAYV--------------EINNS 265

Query: 152 GKNGVWFINSGCSNHMCKDLEMFTTLDHKFTHSVKLRNNSKMQVSGQ 12
            +  VWF++SGCSNHMC + + F+ LD  F HSVKL NN++M V+G+
Sbjct: 266 KREDVWFLDSGCSNHMCGNRKWFSNLDETFKHSVKLGNNTRMAVTGK 312


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/107 (54%), Positives = 70/107 (65%)
 Frame = -2

Query: 332 VECYKCHKLGHFQYECPN*NKEANYAEIEGEDEELLLMAHTAEDEQEMMVMANTDEVQKA 153
           VECY+CH+LGHFQY CP  NKEANYAE+E E E++LLMA+  E E              A
Sbjct: 249 VECYRCHQLGHFQYNCPTWNKEANYAELE-EHEDVLLMAYVEEHE--------------A 293

Query: 152 GKNGVWFINSGCSNHMCKDLEMFTTLDHKFTHSVKLRNNSKMQVSGQ 12
            +N VWF++ GCSNHMC D  MF+ LD  F   VKL NNSK+ V G+
Sbjct: 294 MRNDVWFLDFGCSNHMCGDARMFSELDESFRQQVKLGNNSKITVKGR 340


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/107 (54%), Positives = 72/107 (67%)
 Frame = -2

Query: 332 VECYKCHKLGHFQYECPN*NKEANYAEIEGEDEELLLMAHTAEDEQEMMVMANTDEVQKA 153
           VECYKCH+LGHFQYECP   KEANYAE+E E EE+LLM++               E+ ++
Sbjct: 187 VECYKCHQLGHFQYECPKWEKEANYAELE-EKEEMLLMSYV--------------ELNQS 231

Query: 152 GKNGVWFINSGCSNHMCKDLEMFTTLDHKFTHSVKLRNNSKMQVSGQ 12
            +  VWF++SGCSNHMC + E F  LD +F  SVKL NNSKM V G+
Sbjct: 232 RREDVWFLDSGCSNHMCANKEWFLDLDEEFRQSVKLGNNSKMAVLGK 278


>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
          Length = 1095

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/107 (52%), Positives = 71/107 (66%)
 Frame = -2

Query: 332 VECYKCHKLGHFQYECPN*NKEANYAEIEGEDEELLLMAHTAEDEQEMMVMANTDEVQKA 153
           VECY+CH+LGHFQY+CP  NKEANYAE+E E E++LLMA+  E              Q+A
Sbjct: 185 VECYRCHQLGHFQYDCPTWNKEANYAELE-EHEDVLLMAYVEE--------------QEA 229

Query: 152 GKNGVWFINSGCSNHMCKDLEMFTTLDHKFTHSVKLRNNSKMQVSGQ 12
             N VWF++SG SNHMC D  MF+ LD  F   VKL NNS++ + G+
Sbjct: 230 KHNDVWFLDSGYSNHMCGDARMFSELDESFRQQVKLGNNSRITMKGR 276


>emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]
          Length = 673

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/107 (50%), Positives = 71/107 (66%)
 Frame = -2

Query: 332 VECYKCHKLGHFQYECPN*NKEANYAEIEGEDEELLLMAHTAEDEQEMMVMANTDEVQKA 153
           +EC +CH+LGHF+YECP+ NKEANY E++ E EE+LLM++               E+ KA
Sbjct: 182 MECCRCHQLGHFRYECPSGNKEANYLELD-EKEEMLLMSYV--------------ELYKA 226

Query: 152 GKNGVWFINSGCSNHMCKDLEMFTTLDHKFTHSVKLRNNSKMQVSGQ 12
            +   WF++SGCS+HMC D  MF  LD  F HSVKL NN+KM V G+
Sbjct: 227 KREDAWFLDSGCSSHMCGDRTMFNELDENFRHSVKLGNNTKMDVMGK 273


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