BLASTX nr result

ID: Lithospermum22_contig00039762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039762
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   2e-09
emb|CBI34605.3| unnamed protein product [Vitis vinifera]               47   6e-07

>ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Vitis
           vinifera]
          Length = 1013

 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 25/55 (45%), Positives = 43/55 (78%)
 Frame = +2

Query: 68  LEQVMTVMDFSGTMLENGSIGIPWKPKEELKVIQDLMREAEANPKEGDLYYVISS 232
           L+ +MT+ D SG M+ENG   +P+ P++E +++ DLM ++E++ KEG+LYYV+S+
Sbjct: 67  LKSIMTIAD-SGFMMENGGSCLPYTPEQEKQIVDDLMNKSESSLKEGNLYYVVSN 120



 Score = 28.1 bits (61), Expect(2) = 2e-09
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +3

Query: 279 WFANWQKYTQEA-----VSGDCMDDTSQETCSSMISNSGERPRPID 401
           WF +WQ+Y  +      ++G   D    +   ++ S + ERP PID
Sbjct: 122 WFTSWQRYIGQGNGEYPINGHLSD---SQRLDAVPSKTAERPGPID 164


>emb|CBI34605.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score = 47.4 bits (111), Expect(2) = 6e-07
 Identities = 20/47 (42%), Positives = 36/47 (76%)
 Frame = +2

Query: 80  MTVMDFSGTMLENGSIGIPWKPKEELKVIQDLMREAEANPKEGDLYY 220
           MT+ D SG M+ENG   +P+ P++E +++ DLM ++E++ KEG+L++
Sbjct: 1   MTIAD-SGFMMENGGSCLPYTPEQEKQIVDDLMNKSESSLKEGNLFF 46



 Score = 30.8 bits (68), Expect(2) = 6e-07
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +3

Query: 258 FMLRLLWWFANWQKYTQEA-----VSGDCMDDTSQETCSSMISNSGERPRPID 401
           F   L  WF +WQ+Y  +      ++G   D    +   ++ S + ERP PID
Sbjct: 46  FFFHLFRWFTSWQRYIGQGNGEYPINGHLSD---SQRLDAVPSKTAERPGPID 95


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