BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039728
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    86   1e-23
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    74   3e-22
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]         74   3e-22
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 76   3e-21
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    78   4e-21

>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 86.3 bits (212), Expect(2) = 1e-23
 Identities = 42/90 (46%), Positives = 59/90 (65%)
 Frame = +1

Query: 166 SMKDFRPISCCNTIYKCITSILVARLKPVLDRIVGEQQTAFVMGRKISDGILLMQDLXXX 345
           S+K+FRPI+CC+ IYK I+ IL +R++ VL+ +V E Q+AFV GR I D I+L  +L   
Sbjct: 193 SVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHEL--- 249

Query: 346 XXXXXXXXKAGIPRCTIKVDIMKAFNSVNW 435
                   K   PRC +K+D+ KA+NSV W
Sbjct: 250 --VKSYSRKGISPRCMVKIDLQKAYNSVEW 277



 Score = 48.1 bits (113), Expect(2) = 1e-23
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +2

Query: 5   DGFSVDFFYHSWGIVKDDVVEAVKTFFAICQMPKSLNSTNVVLIPK 142
           DG++V FF  SW I+ D V++A+  FF    MPK +N T + L+PK
Sbjct: 142 DGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPK 187


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 74.3 bits (181), Expect(2) = 3e-22
 Identities = 37/92 (40%), Positives = 53/92 (57%)
 Frame = +1

Query: 160  PQSMKDFRPISCCNTIYKCITSILVARLKPVLDRIVGEQQTAFVMGRKISDGILLMQDLX 339
            P  MKDFRP+S CN IYK +   LV RL+P+L  I+ E Q+AFV GR I+D  L+  +  
Sbjct: 750  PVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNALVAFE-- 807

Query: 340  XXXXXXXXXXKAGIPRCTIKVDIMKAFNSVNW 435
                      +     C +K+D+ KA++ V+W
Sbjct: 808  -CFHSIHKCTRESQDFCALKLDLSKAYDRVDW 838



 Score = 55.5 bits (132), Expect(2) = 3e-22
 Identities = 23/55 (41%), Positives = 35/55 (63%)
 Frame = +2

Query: 2   PDGFSVDFFYHSWGIVKDDVVEAVKTFFAICQMPKSLNSTNVVLIPKMDFPQGLK 166
           PDGF   FF  +WG++K DV+E V+ FF   +  + +N T +V+IPK + P  +K
Sbjct: 700 PDGFPARFFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMK 754


>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score = 74.3 bits (181), Expect(2) = 3e-22
 Identities = 37/92 (40%), Positives = 53/92 (57%)
 Frame = +1

Query: 160 PQSMKDFRPISCCNTIYKCITSILVARLKPVLDRIVGEQQTAFVMGRKISDGILLMQDLX 339
           P  MKDFRP+S CN IYK +   LV RL+P+L  I+ E Q+AFV GR I+D  L+  +  
Sbjct: 486 PVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNALVAFE-- 543

Query: 340 XXXXXXXXXXKAGIPRCTIKVDIMKAFNSVNW 435
                     +     C +K+D+ KA++ V+W
Sbjct: 544 -CFHSIHKCTRESQDFCALKLDLSKAYDRVDW 574



 Score = 55.5 bits (132), Expect(2) = 3e-22
 Identities = 23/55 (41%), Positives = 35/55 (63%)
 Frame = +2

Query: 2   PDGFSVDFFYHSWGIVKDDVVEAVKTFFAICQMPKSLNSTNVVLIPKMDFPQGLK 166
           PDGF   FF  +WG++K DV+E V+ FF   +  + +N T +V+IPK + P  +K
Sbjct: 436 PDGFPARFFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMK 490


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 75.9 bits (185), Expect(2) = 3e-21
 Identities = 38/89 (42%), Positives = 53/89 (59%)
 Frame = +1

Query: 169 MKDFRPISCCNTIYKCITSILVARLKPVLDRIVGEQQTAFVMGRKISDGILLMQDLXXXX 348
           M+D+RPISCCN IYK I+ I+  RLK +L   + + Q+AFV  R + + +LL  +L    
Sbjct: 99  MRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDY 158

Query: 349 XXXXXXXKAGIPRCTIKVDIMKAFNSVNW 435
                      PRC +K+DI KAF+SV W
Sbjct: 159 HKDSIS-----PRCAMKIDISKAFDSVQW 182



 Score = 50.8 bits (120), Expect(2) = 3e-21
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +2

Query: 2   PDGFSVDFFYHSWGIVKDDVVEAVKTFFAICQMPKSLNSTNVVLIPKMD 148
           PDG++ +FF  +W I   D + A+K+FF    +PK LN+T + LIPK D
Sbjct: 46  PDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKD 94


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 77.8 bits (190), Expect(2) = 4e-21
 Identities = 39/89 (43%), Positives = 55/89 (61%)
 Frame = +1

Query: 169  MKDFRPISCCNTIYKCITSILVARLKPVLDRIVGEQQTAFVMGRKISDGILLMQDLXXXX 348
            MKD+RPISCCN +YK I+ IL  RLK +L   + + Q+AFV  R + + +LL  +L    
Sbjct: 823  MKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATEL---- 878

Query: 349  XXXXXXXKAGIPRCTIKVDIMKAFNSVNW 435
                   ++  PRC +K+DI KAF+SV W
Sbjct: 879  -VKDYHKESVTPRCAMKIDISKAFDSVQW 906



 Score = 48.5 bits (114), Expect(2) = 4e-21
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +2

Query: 2   PDGFSVDFFYHSWGIVKDDVVEAVKTFFAICQMPKSLNSTNVVLIPKMD 148
           PDG++ +FF  +W +   D + A+++FF    +PK LN+T + LIPK D
Sbjct: 770 PDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKD 818