BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039668
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   112   3e-23
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    84   9e-15
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    84   1e-14

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  112 bits (280), Expect = 3e-23
 Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 24/170 (14%)
 Frame = +1

Query: 13  FMGKKRDSCTRENCGAKNPSITKPTFGWFNMAGLTDSKATHNAMHGVRLFGGYCRRTAEK 192
           F+  K   C  +NC AK+P +TKPTFGWF+MAGL+D++   N + G +L     R   EK
Sbjct: 244 FLKLKHRDC--KNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEK 301

Query: 193 SSSEVINTDE--------DTDR-------------ALNLETEELVEAAPQEINMRK---T 300
           SSSEV N ++        DTD               +    E     AP E   +K   +
Sbjct: 302 SSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFS 361

Query: 301 RPILPFEVRDVLQQLWENETPLCSLICNIQQNQVSRSDKTAGYFMFFLDT 450
            P+LP EVRD++++LWENE  LCS I +I Q ++  S   AGY MFFL+T
Sbjct: 362 GPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLET 411


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
 Frame = +1

Query: 13  FMGKKRDSCTRENCGAKNPSITKPTFGWFNMAGLTDSKATHNAMHGVRLFGGYCRRTAEK 192
           F+  K   C  +NC AK+P +TKPTFGWF+MAGL+D++   N + G +L         ++
Sbjct: 195 FLKLKHRDC--KNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLNGVDTDE 252

Query: 193 SSSEVINTDEDTDRALNLETEELVEAAPQEINMRKT---RPILPFEVRDVLQQLWENETP 363
           + S +  TD   D  +    E     AP E   +K+    P+LP EVRD++++LWENE  
Sbjct: 253 THSSIAPTDGIQD-TVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAE 311

Query: 364 LCSLICNIQQNQVSRSDKTAGYFMFFLDT 450
           LCS I +I Q ++  S   AGY MFFL+T
Sbjct: 312 LCSFISDILQERLGASGNKAGYSMFFLET 340


>ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|222854025|gb|EEE91572.1|
           predicted protein [Populus trichocarpa]
          Length = 1168

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
 Frame = +1

Query: 25  KRDSCTRENCGAKNPSITKPTFGWFNMAGLTDSKATHNAMHGVRL---FGGYCRR--TAE 189
           K +S   +NC A NP+I KPTFGWF+ AGL+++    N +    +   FGG       AE
Sbjct: 194 KLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPFGGAFEELIDAE 253

Query: 190 KSSSEVINTDEDTDRALNLETEELVEAAPQEINMRKTRPILPFEVRDVLQQLWENETPLC 369
            ++    N +  T+R  NL+  + ++          +  +LP E  D+L+ LW+NE  LC
Sbjct: 254 DATKSPSNKESATNR--NLKEHQKLQHQFTSQKDALSSQLLPSEAMDILKLLWKNEARLC 311

Query: 370 SLICNIQQNQVSRSDKTAGYFMFFLDT 450
           SL+ +IQQ  V +  K AG+ MFFL+T
Sbjct: 312 SLMSDIQQQGVGK--KKAGHSMFFLNT 336


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
 Frame = +1

Query: 13  FMGKKRDSCTRENCGAKNPSITKPTFGWFNMAGLTDSKATHNAMHGVRLFGGYCRRTAE- 189
           F+  K   C  +NC + NP+ITKPTFGWF+ +G++D+    N + G +L GG      E 
Sbjct: 197 FLKPKFKKC--KNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQL-GGLLGSEIEG 253

Query: 190 ----KSSSEVINTDEDTDRALNLETEELVEAAPQEINMRKTRPILPFEVRDVLQQLWENE 357
               + ++E  +    T +    E +E++E   Q+    K   +LP EV++ L+ LW+NE
Sbjct: 254 TTDVEDAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSK--QLLPSEVKEKLELLWKNE 311

Query: 358 TPLCSLICNIQQNQVSRSDKTAGYFMFFLDT 450
             +CS I ++QQ +  +  + AG  MFFL+T
Sbjct: 312 ARICSFISDLQQQEFGK--RKAGPAMFFLET 340


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
 Frame = +1

Query: 10  KFMGKKRDSCTRENCGAKNPSITKPTFGWFNMAGLTDSKATHNAMHGVRLFGGYCRRTAE 189
           KF+  K+ +C  + CGAK+P ITKPTFGWF+M GL   +   NA+          +  + 
Sbjct: 188 KFLKPKQSNC--KYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIR-------RSKPVSV 238

Query: 190 KSSSEVINTDEDTDRALNLETEELVEAAPQEINMRK---TRPILPFEVRDVLQQLWENET 360
            S +E +++ E+ +       E+  + +P E+ M+K   +  +LP EV+D+L++LW+NE 
Sbjct: 239 SSGAEGVSSLEE-ETTTEATVEDFEDVSP-EVFMQKNFSSGHLLPSEVKDILKRLWKNEA 296

Query: 361 PLCSLICNIQQNQVSRSDKTAGYFMFFLDT 450
            LCS I +I Q         AG+ MFFL++
Sbjct: 297 LLCSFISDISQ---QGHGNKAGHSMFFLES 323