BLASTX nr result
ID: Lithospermum22_contig00039651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00039651
(464 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|2... 133 3e-50
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 129 2e-49
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 129 2e-49
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 118 9e-47
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat... 124 5e-46
>ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|222867324|gb|EEF04455.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 133 bits (334), Expect(2) = 3e-50
Identities = 60/95 (63%), Positives = 78/95 (82%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
SKHGKG EVV+LFK M+EEN+V+PDS+TFLAVLS CSHGG+E +GLE+FD ++G D
Sbjct: 289 SKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIE 348
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLPIKPTA 2
IEHYGCV+D+LGRAG+V A + I+++P +PTA
Sbjct: 349 AGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTA 383
Score = 90.5 bits (223), Expect(2) = 3e-50
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = -1
Query: 458 GKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
GKQVH+HVLR ++ F VV QNSLIDMYSKCGNL YAR+IF+++ RTV+SWNAML+G
Sbjct: 231 GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVG 287
Score = 49.3 bits (116), Expect(2) = 5e-09
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = -1
Query: 458 GKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
G++VHAH++++ V LI +Y+KC L AR +FD + R VVSW AM+ G
Sbjct: 29 GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISG 85
Score = 35.8 bits (81), Expect(2) = 5e-09
Identities = 25/90 (27%), Positives = 43/90 (47%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
S+ G E + LF +M ++ +P+ TF VLS+C+ + G +I + H
Sbjct: 87 SQRGFASEALHLFVQMLR-SDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLP 17
I + ++DM +AG++ A E LP
Sbjct: 146 IFVG--SSLLDMYAKAGRIHEARGVFECLP 173
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 129 bits (324), Expect(2) = 2e-49
Identities = 61/95 (64%), Positives = 74/95 (77%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
SKHG G E VELFK MKEEN+V+PDS+TFLAVLS CSHGGME GLEIF ++ D
Sbjct: 756 SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFE 815
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLPIKPTA 2
+IEHYGCVVD+ GRAG+V A +FI+++P +PTA
Sbjct: 816 PEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 850
Score = 92.0 bits (227), Expect(2) = 2e-49
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = -1
Query: 458 GKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
G+QVH+HVLR+++ F VV QNSLIDMYSKCG+L Y+RRIFDS+ RTV+SWNAML+G
Sbjct: 698 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 129 bits (324), Expect(2) = 2e-49
Identities = 61/95 (64%), Positives = 74/95 (77%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
SKHG G E VELFK MKEEN+V+PDS+TFLAVLS CSHGGME GLEIF ++ D
Sbjct: 289 SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFE 348
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLPIKPTA 2
+IEHYGCVVD+ GRAG+V A +FI+++P +PTA
Sbjct: 349 PEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 383
Score = 92.0 bits (227), Expect(2) = 2e-49
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = -1
Query: 458 GKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
G+QVH+HVLR+++ F VV QNSLIDMYSKCG+L Y+RRIFDS+ RTV+SWNAML+G
Sbjct: 231 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 118 bits (295), Expect(2) = 9e-47
Identities = 54/95 (56%), Positives = 74/95 (77%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
SKHG+G EV++LF M+EE +V+PDS+T LAVLS CSHGG+E +GL IF++ SG
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLPIKPTA 2
+EHYGCVVD+LGR+G+V A +FI+++P +PTA
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTA 637
Score = 94.0 bits (232), Expect(2) = 9e-47
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = -1
Query: 464 ELGKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
+LGKQVH HVLRS+I VV QNSLIDMYSKCGNL Y+RRIFD++ RTV+SWNAML+G
Sbjct: 483 DLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVG 541
>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 124 bits (312), Expect(2) = 5e-46
Identities = 60/95 (63%), Positives = 73/95 (76%)
Frame = -2
Query: 286 SKHGKGEEVVELFKRMKEENEVQPDSITFLAVLSACSHGGMEKEGLEIFDNSISGADRRH 107
SKHG EV+ELFK M+EEN+V+PDSIT+LAVLS CSHG +E GLEIF N ++G D
Sbjct: 369 SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIE 428
Query: 106 IDIEHYGCVVDMLGRAGQVVRALQFIEQLPIKPTA 2
DI HYGCVVD+LGRAG+V A FI+++P PTA
Sbjct: 429 PDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTA 463
Score = 85.1 bits (209), Expect(2) = 5e-46
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = -1
Query: 458 GKQVHAHVLRSQISFSVVFQNSLIDMYSKCGNLIYARRIFDSISGRTVVSWNAMLIG 288
GKQVH+HVLRS VV NSLIDMYSKCGN+ YARRIFDS+ RT +SWNAML+G
Sbjct: 311 GKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 367