BLASTX nr result

ID: Lithospermum22_contig00039597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039597
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ...   153   1e-35
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              151   5e-35

>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  158 bits (400), Expect = 4e-37
 Identities = 72/121 (59%), Positives = 95/121 (78%)
 Frame = +2

Query: 2   GKLKEAVGLVKSMPMKANISIWLSILNGCRMHSNLEVAENVAGNIFEIDPRCTGAYVCLS 181
           GKL EA  LV+ MP+KAN  IWL++L+ CR+HSNLEVAE  A +I +++P C+ AYV LS
Sbjct: 454 GKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLS 513

Query: 182 NIYALDGRWSEVARIRGEMKRKGSMKQPGCSWVTQKGVRHTFVSGDKSHPLREKIYEKLD 361
           NIYA  GRW++V+R+R +MK+ G +KQPG SWV  +G +H F+S D+SHPL E+IYEKLD
Sbjct: 514 NIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLD 573

Query: 362 W 364
           W
Sbjct: 574 W 574


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/121 (57%), Positives = 93/121 (76%)
 Frame = +2

Query: 2   GKLKEAVGLVKSMPMKANISIWLSILNGCRMHSNLEVAENVAGNIFEIDPRCTGAYVCLS 181
           G+L+EA  +V SMPMKAN  +WL++L+ CR HSNL++A+  A  IFEI+P C+ AYV LS
Sbjct: 500 GELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLS 559

Query: 182 NIYALDGRWSEVARIRGEMKRKGSMKQPGCSWVTQKGVRHTFVSGDKSHPLREKIYEKLD 361
           N+YA   RW+EVA IR +MK  G +K+PG SW+T KG +H F+S D+SHPL EKIY+KL+
Sbjct: 560 NLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLE 619

Query: 362 W 364
           W
Sbjct: 620 W 620


>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523936|gb|AET04390.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/121 (57%), Positives = 92/121 (76%)
 Frame = +2

Query: 2   GKLKEAVGLVKSMPMKANISIWLSILNGCRMHSNLEVAENVAGNIFEIDPRCTGAYVCLS 181
           G+++EA  L  SMP++AN  +WL +L+ CR+HS+L+VAE  A  IFE++P C+ AYV LS
Sbjct: 506 GEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLS 565

Query: 182 NIYALDGRWSEVARIRGEMKRKGSMKQPGCSWVTQKGVRHTFVSGDKSHPLREKIYEKLD 361
           N+YA   RW EVARIR +MK  G +KQPG SW+T KG+RH F+S D+SHPL E+IYEKL 
Sbjct: 566 NLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLV 625

Query: 362 W 364
           W
Sbjct: 626 W 626


>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/121 (56%), Positives = 93/121 (76%)
 Frame = +2

Query: 2   GKLKEAVGLVKSMPMKANISIWLSILNGCRMHSNLEVAENVAGNIFEIDPRCTGAYVCLS 181
           GKL+EA  L+++MP+KAN  +WL +L+ C MHS LEVAE  A  I +++P C+ AYV LS
Sbjct: 455 GKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLS 514

Query: 182 NIYALDGRWSEVARIRGEMKRKGSMKQPGCSWVTQKGVRHTFVSGDKSHPLREKIYEKLD 361
           N+YA   RWS+V+RIR EMK++G  KQPG SW+T KG R+ F+SGD+SHP  ++IY+KL+
Sbjct: 515 NLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLE 574

Query: 362 W 364
           W
Sbjct: 575 W 575


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/121 (56%), Positives = 93/121 (76%)
 Frame = +2

Query: 2   GKLKEAVGLVKSMPMKANISIWLSILNGCRMHSNLEVAENVAGNIFEIDPRCTGAYVCLS 181
           GKL+EA  L+++MP+KAN  +WL +L+ C MHS LEVAE  A  I +++P C+ AYV LS
Sbjct: 439 GKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLS 498

Query: 182 NIYALDGRWSEVARIRGEMKRKGSMKQPGCSWVTQKGVRHTFVSGDKSHPLREKIYEKLD 361
           N+YA   RWS+V+RIR EMK++G  KQPG SW+T KG R+ F+SGD+SHP  ++IY+KL+
Sbjct: 499 NLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLE 558

Query: 362 W 364
           W
Sbjct: 559 W 559


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