BLASTX nr result
ID: Lithospermum22_contig00039578
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00039578 (543 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera] 64 2e-08 ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain... 63 3e-08 ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ric... 61 1e-07 gb|ACB59206.1| transducin family protein [Brassica oleracea] 60 2e-07 ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis tha... 57 2e-06 >emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera] Length = 507 Score = 63.5 bits (153), Expect = 2e-08 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%) Frame = -1 Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRD 172 Q +T+H C++TLKGHS YVFSLAL+ K LYSGSSD +IR+W RD Sbjct: 149 QXITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWXRD 193 >ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466-like [Vitis vinifera] Length = 427 Score = 63.2 bits (152), Expect = 3e-08 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%) Frame = -1 Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRD 172 Q +T+H C++TLKGHS YVFSLAL+ K LYSGSSD +IR+W RD Sbjct: 69 QAITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWSRD 113 >ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ricinus communis] gi|223540704|gb|EEF42267.1| F-box and wd40 domain protein, putative [Ricinus communis] Length = 431 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/52 (57%), Positives = 36/52 (69%) Frame = -1 Query: 303 QHSSTNHQCLATLKGHSYVFSLALSRKHLYSGSSDSQIRMWRRDMPMQQESP 148 Q S +H+CLA LKGHSY+FSL L LYSGSS+S IR W +D P E+P Sbjct: 64 QTSVVHHRCLAILKGHSYIFSLILDGNILYSGSSNSDIRSWSKD-PSADENP 114 >gb|ACB59206.1| transducin family protein [Brassica oleracea] Length = 410 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Frame = -1 Query: 312 TPSQHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRDMP 166 +P Q S+ HQCLATL HS YV SLALSRK L++GSS+ IR+W R+ P Sbjct: 50 SPLQSSTVEHQCLATLTDHSSYVSSLALSRKSLFTGSSNGDIRVWPREPP 99 >ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis thaliana] gi|2829890|gb|AAC00598.1| Hypothetical protein [Arabidopsis thaliana] gi|332192360|gb|AEE30481.1| WD40 domain-containing protein [Arabidopsis thaliana] Length = 415 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = -1 Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRDMPMQQE 154 Q SS +H CLATLK S YV SLA+S K LY+GSS+S+IR+W R+ P E Sbjct: 53 QSSSVDHHCLATLKDKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPE 103