BLASTX nr result

ID: Lithospermum22_contig00039578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039578
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]    64   2e-08
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...    63   3e-08
ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ric...    61   1e-07
gb|ACB59206.1| transducin family protein [Brassica oleracea]           60   2e-07
ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis tha...    57   2e-06

>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -1

Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRD 172
           Q  +T+H C++TLKGHS YVFSLAL+ K LYSGSSD +IR+W RD
Sbjct: 149 QXITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWXRD 193


>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -1

Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRD 172
           Q  +T+H C++TLKGHS YVFSLAL+ K LYSGSSD +IR+W RD
Sbjct: 69  QAITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWSRD 113


>ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540704|gb|EEF42267.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 431

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1

Query: 303 QHSSTNHQCLATLKGHSYVFSLALSRKHLYSGSSDSQIRMWRRDMPMQQESP 148
           Q S  +H+CLA LKGHSY+FSL L    LYSGSS+S IR W +D P   E+P
Sbjct: 64  QTSVVHHRCLAILKGHSYIFSLILDGNILYSGSSNSDIRSWSKD-PSADENP 114


>gb|ACB59206.1| transducin family protein [Brassica oleracea]
          Length = 410

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -1

Query: 312 TPSQHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRDMP 166
           +P Q S+  HQCLATL  HS YV SLALSRK L++GSS+  IR+W R+ P
Sbjct: 50  SPLQSSTVEHQCLATLTDHSSYVSSLALSRKSLFTGSSNGDIRVWPREPP 99


>ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis thaliana]
           gi|2829890|gb|AAC00598.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192360|gb|AEE30481.1| WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 415

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = -1

Query: 303 QHSSTNHQCLATLKGHS-YVFSLALSRKHLYSGSSDSQIRMWRRDMPMQQE 154
           Q SS +H CLATLK  S YV SLA+S K LY+GSS+S+IR+W R+ P   E
Sbjct: 53  QSSSVDHHCLATLKDKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPE 103


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