BLASTX nr result

ID: Lithospermum22_contig00039538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039538
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29999.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   229   2e-58
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   223   1e-56
ref|XP_003625292.1| Gamma-tubulin complex component [Medicago tr...   223   2e-56
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   222   3e-56

>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  229 bits (583), Expect = 2e-58
 Identities = 113/125 (90%), Positives = 120/125 (96%)
 Frame = -2

Query: 375 ALESLVSEAAKRIDKHLLNVIYERYKFKEHCLAIKRYLLLGRGDFVQYLMDIVGPDLSEP 196
           ALESLV EAAKRIDKHLL+V+Y++YKFKEHCLAIKRYLLLG+GDFVQYLMDIVGP+LSEP
Sbjct: 399 ALESLVIEAAKRIDKHLLDVMYKQYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEP 458

Query: 195 ANTISSFKLAGLLESAVRSSNAQYDDSDILDRLRVKMMPHNTGDRGWDVFSLEYIATVPL 16
           ANTISSFKLAGLLESA+RSSNAQYDD DILDRLRVKMMPH TGDRGWDVFSLEY A VPL
Sbjct: 459 ANTISSFKLAGLLESAIRSSNAQYDDRDILDRLRVKMMPHGTGDRGWDVFSLEYDARVPL 518

Query: 15  NTVFT 1
           NTVFT
Sbjct: 519 NTVFT 523


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  229 bits (583), Expect = 2e-58
 Identities = 113/125 (90%), Positives = 120/125 (96%)
 Frame = -2

Query: 375 ALESLVSEAAKRIDKHLLNVIYERYKFKEHCLAIKRYLLLGRGDFVQYLMDIVGPDLSEP 196
           ALESLV EAAKRIDKHLL+V+Y++YKFKEHCLAIKRYLLLG+GDFVQYLMDIVGP+LSEP
Sbjct: 476 ALESLVIEAAKRIDKHLLDVMYKQYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEP 535

Query: 195 ANTISSFKLAGLLESAVRSSNAQYDDSDILDRLRVKMMPHNTGDRGWDVFSLEYIATVPL 16
           ANTISSFKLAGLLESA+RSSNAQYDD DILDRLRVKMMPH TGDRGWDVFSLEY A VPL
Sbjct: 536 ANTISSFKLAGLLESAIRSSNAQYDDRDILDRLRVKMMPHGTGDRGWDVFSLEYDARVPL 595

Query: 15  NTVFT 1
           NTVFT
Sbjct: 596 NTVFT 600


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  223 bits (568), Expect = 1e-56
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = -2

Query: 375 ALESLVSEAAKRIDKHLLNVIYERYKFKEHCLAIKRYLLLGRGDFVQYLMDIVGPDLSEP 196
           ALE+LV EAAKR DKHLL+V+Y+ YKFKEHCLAIKRYLLLG+GDFVQYLMDIVGP+LSEP
Sbjct: 477 ALETLVVEAAKRTDKHLLDVMYKTYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEP 536

Query: 195 ANTISSFKLAGLLESAVRSSNAQYDDSDILDRLRVKMMPHNTGDRGWDVFSLEYIATVPL 16
           ANTISSFKLAGLLESA+RSSNAQYDD DILDRLRVKMMPH TGDRGWDVFSLEY A VPL
Sbjct: 537 ANTISSFKLAGLLESAIRSSNAQYDDPDILDRLRVKMMPHGTGDRGWDVFSLEYDARVPL 596

Query: 15  NTVFT 1
           +TVFT
Sbjct: 597 DTVFT 601


>ref|XP_003625292.1| Gamma-tubulin complex component [Medicago truncatula]
           gi|355500307|gb|AES81510.1| Gamma-tubulin complex
           component [Medicago truncatula]
          Length = 841

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/124 (87%), Positives = 118/124 (95%)
 Frame = -2

Query: 372 LESLVSEAAKRIDKHLLNVIYERYKFKEHCLAIKRYLLLGRGDFVQYLMDIVGPDLSEPA 193
           LESLV EA+KRIDKHLL+VIYERYKFKEHCLAIKRYLLLG+GDFVQYLMDIVGP+LS PA
Sbjct: 466 LESLVDEASKRIDKHLLDVIYERYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSVPA 525

Query: 192 NTISSFKLAGLLESAVRSSNAQYDDSDILDRLRVKMMPHNTGDRGWDVFSLEYIATVPLN 13
           NTISSFKLAGLLE+A+R+SNAQYDD DILDRLRVKMMPH +GDRGWDVFSLEY A VPL+
Sbjct: 526 NTISSFKLAGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLD 585

Query: 12  TVFT 1
           TVFT
Sbjct: 586 TVFT 589


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  222 bits (565), Expect = 3e-56
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = -2

Query: 375 ALESLVSEAAKRIDKHLLNVIYERYKFKEHCLAIKRYLLLGRGDFVQYLMDIVGPDLSEP 196
           ALE+LV EAAKRIDKHLL+VIY RYKFKEHCLAIKRYLLLG+GDFVQYLMDIVG +LSEP
Sbjct: 482 ALETLVVEAAKRIDKHLLDVIYTRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGQELSEP 541

Query: 195 ANTISSFKLAGLLESAVRSSNAQYDDSDILDRLRVKMMPHNTGDRGWDVFSLEYIATVPL 16
           ANTISSF+LAGLLESA+RSSNAQYDD DILDRLRVKM+PH TGDRGWDVFSLEY A VPL
Sbjct: 542 ANTISSFQLAGLLESAIRSSNAQYDDPDILDRLRVKMLPHGTGDRGWDVFSLEYDARVPL 601

Query: 15  NTVFT 1
           +TVFT
Sbjct: 602 DTVFT 606


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