BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039536
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    69   6e-12
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              74   1e-11
gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]                  73   2e-11
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    73   3e-11
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...    65   4e-11

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 69.3 bits (168), Expect(2) = 6e-12
 Identities = 38/84 (45%), Positives = 47/84 (55%)
 Frame = -3

Query: 256  IMPNYELALGQKVNVGKCSVRFPKKTGISTRQ*ILSRLGMREVQDQGKYLGLPSQIGHTK 77
            I   YE A GQK+N  K S+ F +K     RQ +   LG+  V+  GKYLGLP Q+G  K
Sbjct: 1064 IFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRK 1123

Query: 76   REVFRYIQAKVEGRIRGWNGKLLS 5
             E+F YI  KV+ R  GW    LS
Sbjct: 1124 VELFEYIVTKVKERTEGWAYNYLS 1147



 Score = 25.8 bits (55), Expect(2) = 6e-12
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 320  LFADDTFIFCRAS 282
            LFADD+  FCRAS
Sbjct: 1042 LFADDSLFFCRAS 1054


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
 Frame = -3

Query: 337 IKVSSPSLQTTLLSFAG--------HRSKRGKRLSIMPNYELALGQKVNVGKCSVRFPKK 182
           IKV++ S   + L FA         ++ + G  L I+  YE   GQ +N  K S++F  K
Sbjct: 517 IKVATASPSVSHLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMINFSKSSIQFGHK 576

Query: 181 TGISTRQ*ILSRLGMREVQDQGKYLGLPSQIGHTKREVFRYIQAKVEGRIRGWNGKLLS 5
            G   +  I S LG+  +   G YLGLP  +G +K  +F +++ +++ RI GW+ K LS
Sbjct: 577 VGDDIKAEIKSALGIHSIGGMGSYLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLS 635


>gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]
          Length = 237

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/86 (40%), Positives = 52/86 (60%)
 Frame = -3

Query: 262 LSIMPNYELALGQKVNVGKCSVRFPKKTGISTRQ*ILSRLGMREVQDQGKYLGLPSQIGH 83
           L ++  YE  LGQK+NV K S+ F K      +Q I+ +L M      G+YLGLP  +G 
Sbjct: 32  LHVLTTYEKVLGQKINVTKSSIFFAKSMNEMRKQAIVRQLHMPRSSGDGRYLGLPYLVGR 91

Query: 82  TKREVFRYIQAKVEGRIRGWNGKLLS 5
           +KRE+F+Y++ ++  +  GW  KLLS
Sbjct: 92  SKREIFQYLKDRIWKKAHGWKEKLLS 117


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
 Frame = -3

Query: 337 IKVSSPSLQTTLLSFA--------GHRSKRGKRLSIMPNYELALGQKVNVGKCSVRFPKK 182
           IKV++PS   + L FA         ++ + G  L I+  YE   GQ++N  K S++F  K
Sbjct: 451 IKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHK 510

Query: 181 TGISTRQ*ILSRLGMREVQDQGKYLGLPSQIGHTKREVFRYIQAKVEGRIRGWNGKLLS 5
              S +  I   LG+  +   G YLGLP  +G +K +VF +++ +++ RI GW+ K LS
Sbjct: 511 VEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLS 569


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score = 64.7 bits (156), Expect(2) = 4e-11
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = -3

Query: 262 LSIMPNYELALGQKVNVGKCSVRFPKKTGISTRQ*ILSRLGMREVQDQGKYLGLPSQIGH 83
           L+I+  YE A GQ++N+ K  V F +    + ++ +   +G+R V   GKYLGLPS I  
Sbjct: 88  LTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDR 147

Query: 82  TKREVFRYIQAKVEGRIRGWNGKLLS 5
            K  VF +I+  +  RI  W G+ LS
Sbjct: 148 DKWSVFSFIKDSIWKRINVWRGRALS 173



 Score = 27.7 bits (60), Expect(2) = 4e-11
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 320 LFADDTFIFCRASV*EREEV 261
           LFAD+ F+FCRA+V E + +
Sbjct: 68  LFADNCFLFCRANVVEAQRL 87