BLASTX nr result

ID: Lithospermum22_contig00039469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039469
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27249.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|2...   113   5e-23
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....   103   3e-20

>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  114 bits (286), Expect = 2e-23
 Identities = 54/101 (53%), Positives = 73/101 (72%)
 Frame = -2

Query: 740 GRLEEAWALINDMPVQPDITLFVAFLHGCSIHCRYDLANVAIWKMREKYVHDSCHYVLLS 561
           GRLEEA   I  +P+QPD++L  AFLHGC +H R+DL  VA+ +M E +   +C+YVL+S
Sbjct: 592 GRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMS 651

Query: 560 NLYASEQRWSQAYQMRELMERNGLTKYPGGSQLEFSSSDLF 438
           NLYASE RWSQA Q+ ELM++ GL K PG S ++  +S+ F
Sbjct: 652 NLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDF 692


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  114 bits (286), Expect = 2e-23
 Identities = 54/101 (53%), Positives = 73/101 (72%)
 Frame = -2

Query: 740 GRLEEAWALINDMPVQPDITLFVAFLHGCSIHCRYDLANVAIWKMREKYVHDSCHYVLLS 561
           GRLEEA   I  +P+QPD++L  AFLHGC +H R+DL  VA+ +M E +   +C+YVL+S
Sbjct: 591 GRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMS 650

Query: 560 NLYASEQRWSQAYQMRELMERNGLTKYPGGSQLEFSSSDLF 438
           NLYASE RWSQA Q+ ELM++ GL K PG S ++  +S+ F
Sbjct: 651 NLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDF 691


>ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|222865142|gb|EEF02273.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  113 bits (282), Expect = 5e-23
 Identities = 53/94 (56%), Positives = 70/94 (74%)
 Frame = -2

Query: 740 GRLEEAWALINDMPVQPDITLFVAFLHGCSIHCRYDLANVAIWKMREKYVHDSCHYVLLS 561
           GRL+EA   I  MPVQPD++LF AFLHGC +H R+DL  +AI +M E +  D+C+YVL+ 
Sbjct: 556 GRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMC 615

Query: 560 NLYASEQRWSQAYQMRELMERNGLTKYPGGSQLE 459
           NLYAS+ RWS+  Q+RELM++ GL K PG S +E
Sbjct: 616 NLYASDARWSKVKQVRELMKQRGLMKTPGCSLME 649


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  105 bits (263), Expect = 8e-21
 Identities = 49/104 (47%), Positives = 70/104 (67%)
 Frame = -2

Query: 740 GRLEEAWALINDMPVQPDITLFVAFLHGCSIHCRYDLANVAIWKMREKYVHDSCHYVLLS 561
           G LEEA   I  MPVQP +++F AFLHGC +H R++L   AI KM E +  ++C+YVL+S
Sbjct: 591 GNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVS 650

Query: 560 NLYASEQRWSQAYQMRELMERNGLTKYPGGSQLEFSSSDLFYSQ 429
           NLYAS+ RW    Q+RE++++ GL K PG S +E    +  Y++
Sbjct: 651 NLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMDLQNDSYAK 694


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  103 bits (258), Expect = 3e-20
 Identities = 48/94 (51%), Positives = 67/94 (71%)
 Frame = -2

Query: 740 GRLEEAWALINDMPVQPDITLFVAFLHGCSIHCRYDLANVAIWKMREKYVHDSCHYVLLS 561
           G LE+A  +I  MP+QPD+  F AFLHGC +H R+DL  + I KM + +  D+ +YVL+S
Sbjct: 608 GELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVS 667

Query: 560 NLYASEQRWSQAYQMRELMERNGLTKYPGGSQLE 459
           NLYAS+ RWSQA ++R LM++ GL+K  G S +E
Sbjct: 668 NLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701


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