BLASTX nr result

ID: Lithospermum22_contig00039463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039463
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   122   3e-26
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   120   9e-26
ref|XP_002323859.1| condensin complex components subunit [Populu...   117   1e-24
ref|NP_199671.1| structural maintenance of chromosomes protein 4...   110   2e-22

>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/114 (56%), Positives = 77/114 (67%)
 Frame = +3

Query: 3   EDKLEKDSSKISDITKESEDSTILIPRLEEEIPXXXXXXXXXXXXXXXXXXXXXXXTEIL 182
           EDK+EKDSSKI+ I KESEDS  LIP+LE+ IP                       TE+ 
Sbjct: 600 EDKIEKDSSKINQILKESEDSADLIPKLEDNIPKLQKQLVDEEKVLEEIEENSKVETEVY 659

Query: 183 LCELSDVRGKLEPWERQLVEHKGKLEVASSESKLLNEKHEAGRDTYEDAMKQIN 344
             EL+ VR +LEPWE+QL+EHKGKLEVAS+E KLLNEKHEAGR  +EDA KQ++
Sbjct: 660 RSELARVRVELEPWEKQLIEHKGKLEVASTERKLLNEKHEAGRVAFEDAQKQMD 713


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/114 (56%), Positives = 77/114 (67%)
 Frame = +3

Query: 3   EDKLEKDSSKISDITKESEDSTILIPRLEEEIPXXXXXXXXXXXXXXXXXXXXXXXTEIL 182
           EDK+EKDSSKI+ I KESEDS  LIP+LE+ IP                       TE+ 
Sbjct: 361 EDKIEKDSSKINQILKESEDSADLIPKLEDNIPKLQKQLVDEEKVLEEIEENSKVETEVY 420

Query: 183 LCELSDVRGKLEPWERQLVEHKGKLEVASSESKLLNEKHEAGRDTYEDAMKQIN 344
             EL+ VR +LEPWE+QL+EHKGKLEVAS+E KLLNEKHEAGR  +EDA KQ++
Sbjct: 421 RSELARVRVELEPWEKQLIEHKGKLEVASTERKLLNEKHEAGRVAFEDAQKQMD 474


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
           gi|223525329|gb|EEF27966.1| Structural maintenance of
           chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/114 (55%), Positives = 77/114 (67%)
 Frame = +3

Query: 3   EDKLEKDSSKISDITKESEDSTILIPRLEEEIPXXXXXXXXXXXXXXXXXXXXXXXTEIL 182
           EDKLEKDSSKI D+TKE EDST LIP+LE+++P                       TE  
Sbjct: 359 EDKLEKDSSKIDDLTKECEDSTNLIPKLEDDVPKLQKLLVDEERVLEDIVENAKVETEGH 418

Query: 183 LCELSDVRGKLEPWERQLVEHKGKLEVASSESKLLNEKHEAGRDTYEDAMKQIN 344
             EL  VR +LEPWE+QL++HKGK+EVA +ESKLL+EKHEAGR  +EDA KQI+
Sbjct: 419 RSELVKVRAELEPWEKQLIDHKGKVEVACTESKLLSEKHEAGRAAFEDAKKQID 472


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1256

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/114 (54%), Positives = 75/114 (65%)
 Frame = +3

Query: 3   EDKLEKDSSKISDITKESEDSTILIPRLEEEIPXXXXXXXXXXXXXXXXXXXXXXXTEIL 182
           EDKLEKDSSKI D+TKE E+S  LIP+LE+ IP                       TE  
Sbjct: 364 EDKLEKDSSKIDDLTKECENSANLIPKLEDNIPKLQKLLLEEERMLEEVVENSKGETERY 423

Query: 183 LCELSDVRGKLEPWERQLVEHKGKLEVASSESKLLNEKHEAGRDTYEDAMKQIN 344
             EL  VR +LEPWE+QL++HKGKLEVA +ESKLLNEKHEAGR  +E+A KQ++
Sbjct: 424 RSELVKVRAELEPWEKQLIDHKGKLEVAFTESKLLNEKHEAGRAAFENAHKQMD 477


>ref|NP_199671.1| structural maintenance of chromosomes protein 4 [Arabidopsis
           thaliana] gi|75333958|sp|Q9FJL0.1|SMC4_ARATH RecName:
           Full=Structural maintenance of chromosomes protein 4;
           Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName:
           Full=Chromosome-associated protein C; Short=AtCAP-C
           gi|10177350|dbj|BAB10693.1| chromosome condensation
           protein [Arabidopsis thaliana]
           gi|332008311|gb|AED95694.1| structural maintenance of
           chromosomes protein 4 [Arabidopsis thaliana]
          Length = 1241

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/114 (50%), Positives = 74/114 (64%)
 Frame = +3

Query: 3   EDKLEKDSSKISDITKESEDSTILIPRLEEEIPXXXXXXXXXXXXXXXXXXXXXXXTEIL 182
           EDKLEKDSSKI D+TKESEDS+ LIP+L+E IP                       TE  
Sbjct: 357 EDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAKVETEGY 416

Query: 183 LCELSDVRGKLEPWERQLVEHKGKLEVASSESKLLNEKHEAGRDTYEDAMKQIN 344
             EL+ +R +LEPWE+ L+ H+GKL+VASSES+LL++KHEA    + DA KQ++
Sbjct: 417 RSELTKIRAELEPWEKDLIVHRGKLDVASSESELLSKKHEAALKAFTDAQKQLS 470


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