BLASTX nr result

ID: Lithospermum22_contig00039394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039394
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874481.1| transducin family protein [Arabidopsis lyrat...    66   3e-09
ref|NP_567317.2| transducin/WD40 domain-containing protein [Arab...    66   3e-09
gb|AAD48948.1|AF147262_11 contains similarity to Pfam family PF0...    66   3e-09
gb|AAF99742.1|AC004557_21 F17L21.26 [Arabidopsis thaliana]             64   1e-08
ref|XP_002893469.1| F17L21.26 [Arabidopsis lyrata subsp. lyrata]...    64   1e-08

>ref|XP_002874481.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320318|gb|EFH50740.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 812

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 172 MLKFRCSSVEWKPSAVLALATSPDQTQVAAARADGSLEIW 291
           ML++RCSSV+WKPS V+ALA S D +QVAAAR DGSLEIW
Sbjct: 1   MLEYRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIW 40


>ref|NP_567317.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|19347784|gb|AAL86343.1| unknown protein [Arabidopsis
           thaliana] gi|22136758|gb|AAM91698.1| unknown protein
           [Arabidopsis thaliana] gi|332657167|gb|AEE82567.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 815

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 172 MLKFRCSSVEWKPSAVLALATSPDQTQVAAARADGSLEIW 291
           ML++RCSSV+WKPS V+ALA S D +QVAAAR DGSLEIW
Sbjct: 1   MLEYRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIW 40


>gb|AAD48948.1|AF147262_11 contains similarity to Pfam family PF00400 -WD domain, G-beta
           repeat; score=37.6, E=2.9e-07, N=3 [Arabidopsis
           thaliana] gi|7267337|emb|CAB81111.1| AT4g07410
           [Arabidopsis thaliana]
          Length = 728

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 172 MLKFRCSSVEWKPSAVLALATSPDQTQVAAARADGSLEIW 291
           ML++RCSSV+WKPS V+ALA S D +QVAAAR DGSLEIW
Sbjct: 20  MLEYRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIW 59


>gb|AAF99742.1|AC004557_21 F17L21.26 [Arabidopsis thaliana]
          Length = 1034

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 172 MLKFRCSSVEWKPSAVLALATSPDQTQVAAARADGSLEIW 291
           M ++RCSS++WKPS V+ALATS D +QVAAAR DGSLE+W
Sbjct: 1   MFEYRCSSIDWKPSPVVALATSADGSQVAAAREDGSLELW 40


>ref|XP_002893469.1| F17L21.26 [Arabidopsis lyrata subsp. lyrata]
           gi|297339311|gb|EFH69728.1| F17L21.26 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1048

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 172 MLKFRCSSVEWKPSAVLALATSPDQTQVAAARADGSLEIW 291
           M ++RCSS++WKPS V+ALATS D +QVAAAR DGSLE+W
Sbjct: 1   MFEYRCSSIDWKPSPVVALATSSDGSQVAAAREDGSLELW 40


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