BLASTX nr result

ID: Lithospermum22_contig00039382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039382
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...    68   9e-10
ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methy...    65   6e-09
ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...    64   1e-08
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...    64   1e-08

>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -3

Query: 489 LDAVKSFSKYGQRTAVICLKDGPTPRKYPRDPGTPAKAPL 370
           L +V+S S +GQRTA++CLKD PTPRKYPRDPGTP K+PL
Sbjct: 246 LCSVESHSPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL 285


>ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -3

Query: 489 LDAVKSFSKYGQRTAVICLKDGPTPRKYPRDPGTPAKAPL 370
           L +V+S S YGQRTA+IC KD PTPRKYPRDPGTPAK PL
Sbjct: 249 LCSVESRSPYGQRTAIICSKDRPTPRKYPRDPGTPAKLPL 288


>ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Glycine max]
          Length = 274

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 483 AVKSFSKYGQRTAVICLKDGPTPRKYPRDPGTPAKAPL 370
           +V+S S YGQRTAV+C KD PTP KYPRDPGTPAK PL
Sbjct: 237 SVESQSPYGQRTAVVCSKDRPTPMKYPRDPGTPAKEPL 274


>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -3

Query: 480 VKSFSKYGQRTAVICLKDGPTPRKYPRDPGTPAKAPL 370
           V+S S YGQRTAV+C K+  TPRKYPRDPGTPAK+PL
Sbjct: 245 VESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
           truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA
           small subunit methyltransferase G [Medicago truncatula]
          Length = 518

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -3

Query: 483 AVKSFSKYGQRTAVICLKDGPTPRKYPRDPGTPAKAPL**K*FVELFYSFL 331
           +V+S S YGQRTAVICLKD PTP KYPR PGTP+K PL  + F +  Y  L
Sbjct: 468 SVESQSPYGQRTAVICLKDRPTPMKYPRFPGTPSKEPLTKRTFGDYDYDLL 518


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