BLASTX nr result
ID: Lithospermum22_contig00039311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00039311
(1069 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 226 6e-57
ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 220 4e-55
ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 219 1e-54
ref|NP_178156.1| RING/U-box domain-containing protein [Arabidops... 213 9e-53
ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyra... 211 3e-52
>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
product [Vitis vinifera]
Length = 416
Score = 226 bits (577), Expect = 6e-57
Identities = 107/180 (59%), Positives = 134/180 (74%), Gaps = 4/180 (2%)
Frame = +2
Query: 158 ALDAFFAVWFVYGNVCLLGGYASPVDAPIMYQLCLIFVILSYIGYAMPLILCGTICCFLP 337
ALD FFAVWFV GNV + GG++SP DAP +Y+LC++F+ S IGYAMP ILC TICC LP
Sbjct: 203 ALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLP 262
Query: 338 CIFSAIESQEEY-QTRGASAECINALPTYKFKLKVNNDA--QHINREQKELNVLASQKDE 508
CI S + +E+ QTRGA+ E I+ALPTYKFKLK N D Q +N E VLA+ ++
Sbjct: 263 CIISILGFREDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEK 322
Query: 509 NEALS-KDLACCVCLTEFEDDEEMRELPCLHFFHVECIDTWLKINATCPLCKFEIGLSDG 685
A+S +D CC+CL ++ D+EE+RELPC HFFHVEC+D WLKINA CPLCKFE+G + G
Sbjct: 323 ERAISGEDAVCCICLAKYADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEVGGTSG 382
>ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 220 bits (561), Expect = 4e-55
Identities = 103/180 (57%), Positives = 131/180 (72%), Gaps = 4/180 (2%)
Frame = +2
Query: 158 ALDAFFAVWFVYGNVCLLGGYASPVDAPIMYQLCLIFVILSYIGYAMPLILCGTICCFLP 337
ALD FFAVWFV GNV + GG+ SP DAP +Y+LC++F+ S IGYAMP ILC TICC LP
Sbjct: 235 ALDCFFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLP 294
Query: 338 CIFSAIESQEEY-QTRGASAECINALPTYKFKLK--VNNDAQHINREQKELNVLASQKDE 508
CI S + +E++ Q RGA+ E INALP +KFKLK N D Q +N E +LA+ ++
Sbjct: 295 CIISVLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNAAIDEGGILAAGTEK 354
Query: 509 NEALS-KDLACCVCLTEFEDDEEMRELPCLHFFHVECIDTWLKINATCPLCKFEIGLSDG 685
+S +D CC+CL ++ DD+E+RELPC HFFHV C+D WLKINATCPLCK E+G S+G
Sbjct: 355 ERMISGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLCKNEVGTSNG 414
>ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 219 bits (557), Expect = 1e-54
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 4/180 (2%)
Frame = +2
Query: 158 ALDAFFAVWFVYGNVCLLGGYASPVDAPIMYQLCLIFVILSYIGYAMPLILCGTICCFLP 337
ALD FFAVWFV GNV + GG+ SP DAP +Y+LC++F+ S IGYAMP ILC TICC LP
Sbjct: 235 ALDCFFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLP 294
Query: 338 CIFSAIESQEEY-QTRGASAECINALPTYKFKLK--VNNDAQHINREQKELNVLASQKDE 508
CI S + +E++ Q RGA+ E INALP +KFKLK N D Q N E +LA+ ++
Sbjct: 295 CIISVLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDANSAIDEGGILAAGTEK 354
Query: 509 NEALS-KDLACCVCLTEFEDDEEMRELPCLHFFHVECIDTWLKINATCPLCKFEIGLSDG 685
+S +D CC+CL ++ DD+E+RELPC H FHVEC+D WLKINATCPLCK E+G S+G
Sbjct: 355 ERMISGEDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINATCPLCKNEVGTSNG 414
>ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc
finger protein; 53384-54880 [Arabidopsis thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis
thaliana] gi|332198277|gb|AEE36398.1| RING/U-box
domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 213 bits (541), Expect = 9e-53
Identities = 98/175 (56%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Frame = +2
Query: 158 ALDAFFAVWFVYGNVCLLGGYASPVDAPIMYQLCLIFVILSYIGYAMPLILCGTICCFLP 337
A+D FFAVWFV GNV + GG++SP D+P +Y+LC+ F+ S IGYAMP ILC TICC LP
Sbjct: 229 AIDCFFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLP 288
Query: 338 CIFSAIESQEEY-QTRGASAECINALPTYKFKLKVNNDAQHINREQKELNVLASQKDENE 514
C+ S + +E + QTRGA+AE INALP Y+FK K ND + + +L SQK +
Sbjct: 289 CLISVLGFRENFSQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQK-KRL 347
Query: 515 ALSKDLACCVCLTEFEDDEEMRELPCLHFFHVECIDTWLKINATCPLCKFEIGLS 679
+D +CC+CLT + DDE++RELPC H FHV+C+D WLKINATCPLCK E+G S
Sbjct: 348 ISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGES 402
>ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 211 bits (536), Expect = 3e-52
Identities = 97/177 (54%), Positives = 125/177 (70%), Gaps = 1/177 (0%)
Frame = +2
Query: 158 ALDAFFAVWFVYGNVCLLGGYASPVDAPIMYQLCLIFVILSYIGYAMPLILCGTICCFLP 337
A+D FFAVWFV GNV + GG++SP D+P +Y+LC+ F+ S IGYAMP ILC TICC LP
Sbjct: 223 AIDCFFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLP 282
Query: 338 CIFSAIESQEEY-QTRGASAECINALPTYKFKLKVNNDAQHINREQKELNVLASQKDENE 514
C+ S + +E + QTRGA+ E INALP Y+FK K ND + + +L SQK +
Sbjct: 283 CLISVLGFRENFSQTRGATTEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQK-KRL 341
Query: 515 ALSKDLACCVCLTEFEDDEEMRELPCLHFFHVECIDTWLKINATCPLCKFEIGLSDG 685
+D +CC+CLT + DD ++RELPC H FHV+C+D WLKINATCPLCK E+G S G
Sbjct: 342 ISGEDASCCICLTRYGDDVQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGESSG 398