BLASTX nr result

ID: Lithospermum22_contig00039276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039276
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]    80   1e-13
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]    79   4e-13
emb|CAA20201.1| putative transposable element [Arabidopsis thali...    78   8e-13
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    77   2e-12
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...    75   7e-12

>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
          Length = 817

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/57 (59%), Positives = 45/57 (78%)
 Frame = -3

Query: 388 LCKNLVFHDRTKHIDVRFHYIRDIVEQGIVKLEKIPSEFNPADMGTKCLPVEKFISC 218
           LCKNL+FH+RTKH+DVR+H+IR+ V  G +KLEKI +  NPA+M TK LP+ K+  C
Sbjct: 738 LCKNLMFHERTKHVDVRYHFIRETVSSGAMKLEKISTTDNPANMATKVLPIRKYRYC 794


>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
          Length = 421

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = -3

Query: 388 LCKNLVFHDRTKHIDVRFHYIRDIVEQGIVKLEKIPSEFNPADMGTKCLPVEKF 227
           LCKNLVFH+RTKH+DVR+H+IR+IV  G VKLEKI +  N ADM TK L V KF
Sbjct: 366 LCKNLVFHERTKHVDVRYHFIREIVSLGAVKLEKISTTDNSADMATKVLLVSKF 419


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
            gi|7268932|emb|CAB79135.1| putative transposable element
            [Arabidopsis thaliana]
          Length = 1308

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = -3

Query: 388  LCKNLVFHDRTKHIDVRFHYIRDIVEQGIVKLEKIPSEFNPADMGTKCLPVEKF 227
            L KN  FHDRTKH++V+F++IRDI+E G VK+ KI +  NPADM TKC+PV+KF
Sbjct: 1244 LSKNNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKF 1297


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -3

Query: 388  LCKNLVFHDRTKHIDVRFHYIRDIVEQGIVKLEKIPSEFNPADMGTKCLPVEKFISCQRI 209
            L KN  FH+RTKHIDVRFH+IRDI EQG+V + KI ++ NPADM TK +   KF  C  +
Sbjct: 874  LTKNQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNL 933

Query: 208  LNFDI 194
            +N  +
Sbjct: 934  INVGV 938


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = -3

Query: 388  LCKNLVFHDRTKHIDVRFHYIRDIVEQGIVKLEKIPSEFNPADMGTKCLPVEKFISCQRI 209
            L KN V+H+RTKHIDVRF+YIRD+VE G V + KI +  NP D  TKC+PV KF S   +
Sbjct: 1290 LSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGV 1349

Query: 208  L 206
            L
Sbjct: 1350 L 1350


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