BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039248
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-24
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   115   6e-24
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   102   7e-20
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    98   1e-18

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  125 bits (314), Expect = 8e-27
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = -1

Query: 685 YCSIRRIDLALELHRKLIKLESTFDVKAYNFLLKGLFREKRVEEAERIFEFMRRYSTLSC 506
           YC  R+ID ++ LH K+ K++ + DV  YN LL GLF EKR+E+A  +F+ MR  + LS 
Sbjct: 464 YCRSRQIDSSIALHEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSS 523

Query: 505 ECFTVMIRGLCQEKKFREAMKLHDEMLKLGLKPRENTYKRLISGFQ 368
             FT+M+ GLC+E++ R+AMK HDEMLK+GLKP   TYKRLISGF+
Sbjct: 524 TSFTIMVSGLCRERELRKAMKFHDEMLKMGLKPDRATYKRLISGFK 569


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  116 bits (291), Expect = 4e-24
 Identities = 55/105 (52%), Positives = 75/105 (71%)
 Frame = -1

Query: 685 YCSIRRIDLALELHRKLIKLESTFDVKAYNFLLKGLFREKRVEEAERIFEFMRRYSTLSC 506
           YCS R+ID A+ LH K+ KL+++ DV  YN LL GL +  R+EE  R+F++M+    ++ 
Sbjct: 458 YCSRRQIDKAVALHNKMEKLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNS 517

Query: 505 ECFTVMIRGLCQEKKFREAMKLHDEMLKLGLKPRENTYKRLISGF 371
           E FT+ IRGLC+ K+ R+AMKLHDEML +GLKP +  YKRLI  F
Sbjct: 518 ESFTITIRGLCRAKEMRKAMKLHDEMLDMGLKPDKAAYKRLILEF 562


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  115 bits (289), Expect = 6e-24
 Identities = 56/105 (53%), Positives = 76/105 (72%)
 Frame = -1

Query: 685 YCSIRRIDLALELHRKLIKLESTFDVKAYNFLLKGLFREKRVEEAERIFEFMRRYSTLSC 506
           YCS ++ D AL LH  L KL+++ D+ AYN LL GL +E RVEE+ ++F++M+     + 
Sbjct: 487 YCSSKQTDKALALHNTLEKLQASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANS 546

Query: 505 ECFTVMIRGLCQEKKFREAMKLHDEMLKLGLKPRENTYKRLISGF 371
             FTV+IRGLC+ K+ R+AMKLHDEML +GLKP + TYKRLI  F
Sbjct: 547 ASFTVIIRGLCRAKELRKAMKLHDEMLNMGLKPDKPTYKRLILEF 591


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  102 bits (254), Expect = 7e-20
 Identities = 50/108 (46%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
 Frame = -1

Query: 685 YCSIRRIDLALELHRKLIKLESTFDVKAYNFLLKGLFREKR--VEEAERIFEFMRRYSTL 512
           YC   +++ AL LH K+ K++ + DV AYN +L  L   ++  VEEA  +FE+M+  +++
Sbjct: 478 YCRSGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSV 537

Query: 511 SCECFTVMIRGLCQEKKFREAMKLHDEMLKLGLKPRENTYKRLISGFQ 368
           + + FT+MI+GLC+ K+ ++AM+ HDEML+LGLKP   TYKRLI GF+
Sbjct: 538 NSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGFK 585


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/103 (46%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = -1

Query: 670 RIDLALELHRKLIKLESTFDVKAYNFLLKGLFREKR--VEEAERIFEFMRRYSTLSCECF 497
           +++ AL LH K+ K++ + DV AYN +L  L   ++  VEEA  +FE+M+  ++++ + F
Sbjct: 449 KLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSF 508

Query: 496 TVMIRGLCQEKKFREAMKLHDEMLKLGLKPRENTYKRLISGFQ 368
           T+MI+GLC+ K+ ++AM+ HDEML+LGLKP   TYKRLI GF+
Sbjct: 509 TIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGFK 551