BLASTX nr result

ID: Lithospermum22_contig00039233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039233
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like...   139   2e-31
gb|ACU18212.1| unknown [Glycine max]                                  139   2e-31
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...   138   5e-31
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   134   8e-30

>ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 236

 Score =  139 bits (351), Expect = 2e-31
 Identities = 60/98 (61%), Positives = 75/98 (76%)
 Frame = -3

Query: 347 IPGLESECVICLQDFFTGEKIKILPKCNHGFHVKCIDKWLNCHSSCPTCRHCLIETCQKI 168
           +P L+SECVICL +F +GEK++ILPKCNHGFH++CIDKWL+ HSSCP CR CLIETCQKI
Sbjct: 135 LPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKI 194

Query: 167 VGCTHPPQPSINDSVPGRPQEIIIRIATLQSEGMVRNF 54
           VGC+     S    V   P+ I+  IA L+ EG+VRN+
Sbjct: 195 VGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNY 232


>gb|ACU18212.1| unknown [Glycine max]
          Length = 236

 Score =  139 bits (351), Expect = 2e-31
 Identities = 60/98 (61%), Positives = 75/98 (76%)
 Frame = -3

Query: 347 IPGLESECVICLQDFFTGEKIKILPKCNHGFHVKCIDKWLNCHSSCPTCRHCLIETCQKI 168
           +P L+SECVICL +F +GEK++ILPKCNHGFH++CIDKWL+ HSSCP CR CLIETCQKI
Sbjct: 135 LPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKI 194

Query: 167 VGCTHPPQPSINDSVPGRPQEIIIRIATLQSEGMVRNF 54
           VGC+     S    V   P+ I+  IA L+ EG+VRN+
Sbjct: 195 VGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNY 232


>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/98 (63%), Positives = 77/98 (78%)
 Frame = -3

Query: 347 IPGLESECVICLQDFFTGEKIKILPKCNHGFHVKCIDKWLNCHSSCPTCRHCLIETCQKI 168
           +PGL++ECVICL DF  GE+I+ILPKCNHGFHV+CIDKWLN HSSCPTCRHCLIETCQKI
Sbjct: 128 LPGLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKI 187

Query: 167 VGCTHPPQPSINDSVPGRPQEIIIRIATLQSEGMVRNF 54
           +GC+   Q S +++ P   + +I  I  L+ EG  RN+
Sbjct: 188 IGCS---QASSSETPPPLQESMI--IVPLEPEGFSRNY 220


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  135 bits (339), Expect = 5e-30
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = -3

Query: 347 IPGLESECVICLQDFFTGEKIKILPKCNHGFHVKCIDKWLNCHSSCPTCRHCLIETCQKI 168
           +PGL++ECVICL +F  GE++++LPKC+HGFHVKCIDKWL+ HSSCPTCRHCLIETCQKI
Sbjct: 128 LPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIETCQKI 187

Query: 167 VGCTHPPQPSINDSVPGRPQEIIIRIATLQSEGMVRNF 54
           +GC+     +   S+P   QE I+ I  L+ EG++R++
Sbjct: 188 IGCSQ--ASTSGTSLP--VQETIVSILPLEPEGLIRDY 221


>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/98 (60%), Positives = 77/98 (78%)
 Frame = -3

Query: 347 IPGLESECVICLQDFFTGEKIKILPKCNHGFHVKCIDKWLNCHSSCPTCRHCLIETCQKI 168
           +PGL++EC ICL +F  GE++++LPKCNHGFHV+CIDKWL+ HSSCPTCRHCLIETCQKI
Sbjct: 128 LPGLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCLIETCQKI 187

Query: 167 VGCTHPPQPSINDSVPGRPQEIIIRIATLQSEGMVRNF 54
           VGC+   Q S +D      QE I+ IA L+ E ++R++
Sbjct: 188 VGCS---QTSSSDP---PVQESIVNIAPLEPEALIRSY 219


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