BLASTX nr result

ID: Lithospermum22_contig00039193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039193
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   110   1e-22
ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   109   3e-22
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   108   6e-22
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   102   5e-20
ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi...   100   2e-19

>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = +3

Query: 30  TKEEMGAEIHRLELHAYRCTLEALHASGTLSWEQELLMTSLRISLHISNDEHLMELRTLI 209
           T+EE+ AEIHRLELHAYRCT+EALHASG LSWEQE LMT+LR+SLHISNDEHLMELR LI
Sbjct: 336 TQEELAAEIHRLELHAYRCTIEALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLI 395

Query: 210 SN 215
           S+
Sbjct: 396 SS 397


>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/61 (83%), Positives = 57/61 (93%)
 Frame = +3

Query: 30  TKEEMGAEIHRLELHAYRCTLEALHASGTLSWEQELLMTSLRISLHISNDEHLMELRTLI 209
           TKEE+ AEIHRLELHAYRCT+EALHASG LSWEQE L+T+LR+SLHISNDEHLMELR L+
Sbjct: 347 TKEELAAEIHRLELHAYRCTIEALHASGPLSWEQETLVTNLRLSLHISNDEHLMELRNLV 406

Query: 210 S 212
           S
Sbjct: 407 S 407


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  108 bits (270), Expect = 6e-22
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +3

Query: 30  TKEEMGAEIHRLELHAYRCTLEALHASGTLSWEQELLMTSLRISLHISNDEHLMELRTLI 209
           T+EE+ AEIHRLELHAY CT+EALHASG LSWEQE LMT+LR+SLHISNDEHLMELR LI
Sbjct: 329 TQEELAAEIHRLELHAYHCTIEALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLI 388

Query: 210 SN 215
           S+
Sbjct: 389 SS 390


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  102 bits (253), Expect = 5e-20
 Identities = 47/70 (67%), Positives = 58/70 (82%)
 Frame = +3

Query: 3   YNEEMSSSFTKEEMGAEIHRLELHAYRCTLEALHASGTLSWEQELLMTSLRISLHISNDE 182
           Y E  +   T EE+ AE+HRLELHAYRCT+EAL+ASG  SWEQE ++T+LR+SLHISNDE
Sbjct: 306 YEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQEEMVTNLRLSLHISNDE 365

Query: 183 HLMELRTLIS 212
           HLME+R L+S
Sbjct: 366 HLMEVRNLVS 375


>ref|XP_003609252.1| RNA binding protein [Medicago truncatula]
           gi|355510307|gb|AES91449.1| RNA binding protein
           [Medicago truncatula]
          Length = 468

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   YNEEMSSSFTKEEMGAEIHRLELHAYRCTLEALHASGTLSWEQELLMTSLRISLHISNDE 182
           Y E   S  T++E+  +IHRLELHAYRCT+EAL ASG LSWEQE LMT+LR+SL+ISNDE
Sbjct: 308 YMEATCSRPTRKELAMKIHRLELHAYRCTIEALFASGPLSWEQEALMTNLRLSLNISNDE 367

Query: 183 HLMELRTLISNSKKS 227
           HL ELR LIS+  ++
Sbjct: 368 HLTELRNLISSEHRT 382


Top