BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039162
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30769.1| photosystem I assembly protein ycf4 [Ehretia acum...   330   2e-88
gb|ADD30766.1| photosystem I assembly protein ycf4 [Antirrhinum ...   329   4e-88
ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chlorop...   327   1e-87
ref|YP_004891616.1| ycf4 gene product (chloroplast) [Nicotiana u...   327   1e-87
gb|ABG74742.1| YCF4 protein [Forsythia europaea]                      327   1e-87

>gb|ADD30769.1| photosystem I assembly protein ycf4 [Ehretia acuminata]
          Length = 184

 Score =  330 bits (846), Expect = 2e-88
 Identities = 161/184 (87%), Positives = 165/184 (89%)
 Frame = +3

Query: 78  MSWRSEHIWIELIRGSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISFFPSQQIVFF 257
           MSWRSEHIWIELIRGSRKISNFCWA                 YLGRNLISFFPSQQIVFF
Sbjct: 1   MSWRSEHIWIELIRGSRKISNFCWAFILFLGSLGFLLVGISSYLGRNLISFFPSQQIVFF 60

Query: 258 PQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDKKEGIVCIFRWGFPGKNRRIFLQF 437
           PQGIVMSFYGIAGLFISSYLWC ISWN+GSGYDRFD+KEGIVCIFRWGFPGKNRRIFL+F
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCAISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRF 120

Query: 438 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 617
           LIKDIQSVRIEVKEGI ARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP
Sbjct: 121 LIKDIQSVRIEVKEGISARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 180

Query: 618 IEVY 629
           IEV+
Sbjct: 181 IEVF 184


>gb|ADD30766.1| photosystem I assembly protein ycf4 [Antirrhinum majus]
          Length = 184

 Score =  329 bits (843), Expect = 4e-88
 Identities = 157/184 (85%), Positives = 166/184 (90%)
 Frame = +3

Query: 78  MSWRSEHIWIELIRGSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISFFPSQQIVFF 257
           MSWRSEHIWIELI GSRK+SNFCWA                 YLGRNLISFFPS+QI+FF
Sbjct: 1   MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISFFPSEQIIFF 60

Query: 258 PQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDKKEGIVCIFRWGFPGKNRRIFLQF 437
           PQGIVMSFYGIAGLFISSYLWCTISWN+GSGYDRFD+KEGIVCIFRWGFPGKNRRIFL+F
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRF 120

Query: 438 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 617
           L+KDIQ+VRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP
Sbjct: 121 LLKDIQAVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 180

Query: 618 IEVY 629
           IEV+
Sbjct: 181 IEVF 184


>ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438687615|emb|CCP47141.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688299|emb|CCP47230.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688423|emb|CCP47319.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
          Length = 184

 Score =  327 bits (839), Expect = 1e-87
 Identities = 158/184 (85%), Positives = 164/184 (89%)
 Frame = +3

Query: 78  MSWRSEHIWIELIRGSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISFFPSQQIVFF 257
           MSWRSEHIWIELI GSRK+SNFCWA                 YLGRNLISF PSQQI+FF
Sbjct: 1   MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISFVPSQQIIFF 60

Query: 258 PQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDKKEGIVCIFRWGFPGKNRRIFLQF 437
           PQGIVMSFYGIAGLFISSYLWCTISWN+GSGYDRFD+KEGIVCIFRWGFPGKNRRIFL+F
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRF 120

Query: 438 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 617
           LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTR DENLTPREIEQKAAELAYFLRVP
Sbjct: 121 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRADENLTPREIEQKAAELAYFLRVP 180

Query: 618 IEVY 629
           IEV+
Sbjct: 181 IEVF 184


>ref|YP_004891616.1| ycf4 gene product (chloroplast) [Nicotiana undulata]
           gi|347453917|gb|AEO95575.1| photosystem I assembly
           protein ycf4 (chloroplast) [Nicotiana undulata]
           gi|347454028|gb|AEO95685.1| photosystem I assembly
           protein ycf4 [synthetic construct]
          Length = 184

 Score =  327 bits (838), Expect = 1e-87
 Identities = 157/184 (85%), Positives = 165/184 (89%)
 Frame = +3

Query: 78  MSWRSEHIWIELIRGSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISFFPSQQIVFF 257
           M+WRSEHIWIELI GSRKISNFCWA                 YLGRNLISFFP QQI+FF
Sbjct: 1   MTWRSEHIWIELITGSRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFF 60

Query: 258 PQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDKKEGIVCIFRWGFPGKNRRIFLQF 437
           PQGIVMSFYGIAGLFISSYLWCTISWN+GSGYDRFD+KEGIVCIFRWGFPGKNRRIFL+F
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRF 120

Query: 438 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 617
           LIKDIQSVRIEVKEGIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLRVP
Sbjct: 121 LIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLRVP 180

Query: 618 IEVY 629
           IEV+
Sbjct: 181 IEVF 184


>gb|ABG74742.1| YCF4 protein [Forsythia europaea]
          Length = 184

 Score =  327 bits (838), Expect = 1e-87
 Identities = 158/184 (85%), Positives = 165/184 (89%)
 Frame = +3

Query: 78  MSWRSEHIWIELIRGSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISFFPSQQIVFF 257
           MSWRSE IWIELI GSRK+SNFCWA                 YLGRNLISFFPSQQI+FF
Sbjct: 1   MSWRSEDIWIELITGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFF 60

Query: 258 PQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDKKEGIVCIFRWGFPGKNRRIFLQF 437
           PQGIVMSFYGIAGLFISSYLWCTISWN+GSGYDRFD+KEGIVCIFRWGFPGKNRRIFL+F
Sbjct: 61  PQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRF 120

Query: 438 LIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLRVP 617
           LIKDIQSVRIEVKEGIYARRVLYMDIRG+GAIPLTRTDENLTPREIEQKAAELAYFLRVP
Sbjct: 121 LIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKAAELAYFLRVP 180

Query: 618 IEVY 629
           IEV+
Sbjct: 181 IEVF 184