BLASTX nr result

ID: Lithospermum22_contig00039154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039154
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299071.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002533725.1| DNA binding protein, putative [Ricinus commu...    57   2e-06
ref|XP_002330579.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002299071.1| predicted protein [Populus trichocarpa] gi|222846329|gb|EEE83876.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +2

Query: 32  SGDQQVIRLNKQSDNEIIEDSDGLRGTREASEIFNAECVLWDLQSEDLMNPIV 190
           +GDQQ  RL++  DNE  E+ +G +  R+ S IFN +CVLWD+ S+DLMNPI+
Sbjct: 276 TGDQQG-RLHEMLDNENGEEFEGGKEIRKVSSIFNTDCVLWDMPSDDLMNPII 327


>ref|XP_002533725.1| DNA binding protein, putative [Ricinus communis]
           gi|223526363|gb|EEF28656.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 208

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = +2

Query: 32  SGDQQVIRLNKQSDNEIIEDSDGLRGTREASEIFNAECVLWDLQSEDLMNPIV 190
           +GDQQ  RL+++ + E  E+S+G +  R +S IFN +CVLWDL S+DLMNPIV
Sbjct: 157 AGDQQG-RLHEKLEVENGEESEGGKEIRNSSSIFNTDCVLWDLPSDDLMNPIV 208


>ref|XP_002330579.1| predicted protein [Populus trichocarpa] gi|222872137|gb|EEF09268.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +2

Query: 32  SGDQQVIRLNKQSDNEIIEDSDGLRGTREASEIFNAECVLWDLQSEDLMNPIV 190
           +GDQQ  RL+++ D+E  E+S G +  R  S +FN +CVLWDL S+DLMN IV
Sbjct: 276 AGDQQG-RLHEKLDDENGEESQGGKEIRNGSSLFNTDCVLWDLPSDDLMNSIV 327


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