BLASTX nr result

ID: Lithospermum22_contig00039141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039141
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]           74   1e-11
ref|XP_004138613.1| PREDICTED: chloride channel protein CLC-b-li...    70   2e-10
ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...    69   3e-10
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...    68   7e-10
ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...    68   9e-10

>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   HILIVPKHHVAGVPPVVGILTRQDLRAHNILNVFPDLSKSEGSKKGH 143
           H+LIVPK+  AGV PVVGILTRQDLRAHNIL+VFP L KS+  KKG+
Sbjct: 740 HMLIVPKYQAAGVSPVVGILTRQDLRAHNILSVFPHLEKSKSGKKGN 786


>ref|XP_004138613.1| PREDICTED: chloride channel protein CLC-b-like [Cucumis sativus]
           gi|449523299|ref|XP_004168661.1| PREDICTED: chloride
           channel protein CLC-b-like [Cucumis sativus]
           gi|386649465|gb|AFJ15538.1| chloride channel a [Cucumis
           sativus]
          Length = 789

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   HILIVPKHHVAGVPPVVGILTRQDLRAHNILNVFPDLSKSEGSKK 137
           H+LIVPK+  AGVPPV+GILTRQDLR +NIL+ FPDL++ +G++K
Sbjct: 743 HLLIVPKYEAAGVPPVIGILTRQDLRPYNILSAFPDLARIKGNEK 787


>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
           gi|223549430|gb|EEF50918.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 787

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   HILIVPKHHVAGVPPVVGILTRQDLRAHNILNVFPDLSKSEGSKKGH 143
           H+LIVPK+  +GVPPVVGILTRQDLRA+NIL+ FP L++S+  +K H
Sbjct: 741 HLLIVPKYEASGVPPVVGILTRQDLRAYNILSAFPHLARSKDREKRH 787


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +3

Query: 3   HILIVPKHHVAGVPPVVGILTRQDLRAHNILNVFPDLSKSEGSKKGH 143
           H+LI+PK+  AGVPPVVGILTRQDLRAHNIL  FP L  S+  +K H
Sbjct: 739 HMLILPKYQAAGVPPVVGILTRQDLRAHNILLAFPHLQGSKSREKKH 785


>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
           gi|296082356|emb|CBI21361.3| unnamed protein product
           [Vitis vinifera]
          Length = 789

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   HILIVPKHHVAGVPPVVGILTRQDLRAHNILNVFPDLSKSEGSKKGH 143
           H+LIVPK+  AGV PVVGILTRQDLRA+NIL  FP L+KS+  +KG+
Sbjct: 743 HMLIVPKYQAAGVSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789


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