BLASTX nr result

ID: Lithospermum22_contig00039123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039123
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]    99   2e-19
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]                94   9e-19
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    95   2e-18
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]    91   1e-16
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               86   1e-16

>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score = 99.0 bits (245), Expect(2) = 2e-19
 Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
 Frame = +2

Query: 2    TPTTALVPHQSSTQVPPPSLNTYRLRSSTNSLKPTNPYDPFAYMITAHSLTEPTCFSQAN 181
            +P  +L   +    VPPP+ +    R+  N  KP    +   +  T  + T PT  SQA 
Sbjct: 795  SPQPSLTTTEPPIPVPPPTQHRMTTRAKNNITKPIQKLNLHTHKPTFQTTT-PTSISQAL 853

Query: 182  KCP-----LQDEINAMIRTNTWTLVPRTSTMNIIGCRWIFKLKRDSLGNVVRHRARLVAK 346
            K       + DE +A++R  TW LVP     N++GC+WIF++KR+S G++ R++ARLVAK
Sbjct: 854  KDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAK 913

Query: 347  GNHQQEGVDYFDT 385
            G HQ+ GVDY +T
Sbjct: 914  GFHQRPGVDYHET 926



 Score = 21.6 bits (44), Expect(2) = 2e-19
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 385 FSPVVKHYTICILLSL 432
           FSPVVK  T+ ++LS+
Sbjct: 927 FSPVVKPTTVRLVLSI 942


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score = 94.4 bits (233), Expect(2) = 9e-19
 Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
 Frame = +2

Query: 23  PHQSSTQVPPPSLNTYRLRSSTNSLKPTNPYDPFAYMITAHSLTEPTCFSQANKC----- 187
           PH S+T       NT    S+  SLKP  P+       T+ ++ EP+C S+A K      
Sbjct: 596 PHSSNTSHSGDFGNT----SAVGSLKPKKPFSMSTTTPTS-AIVEPSCHSRAIKDVHWRH 650

Query: 188 PLQDEINAMIRTNTWTLVPRTSTMNIIGCRWIFKLKRDSLGNVVRHRARLVAKGNHQQEG 367
            + +E NA+I+  TW LVP + + NIIGC+W+FK K  S G++ R++ARLVAKG HQ+ G
Sbjct: 651 AMSEEYNALIQNGTWELVPLSPSQNIIGCKWVFKRKLKSDGSLDRYKARLVAKGYHQRPG 710

Query: 368 VDYFDT 385
           +D+ DT
Sbjct: 711 LDFADT 716



 Score = 23.9 bits (50), Expect(2) = 9e-19
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 385 FSPVVKHYTICILLSL 432
           FSPVVK  TI +LLSL
Sbjct: 717 FSPVVKPATIRLLLSL 732


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 94.7 bits (234), Expect(2) = 2e-18
 Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 13/141 (9%)
 Frame = +2

Query: 2    TPTTALVPH---QSSTQVPPPSLNTYRLRSSTNSLKPTNPYDPF--AYMITAHSLT---E 157
            +P+ +L P    Q S  +P PS     +  S N++     +  F  ++ +T H L    E
Sbjct: 839  SPSLSLSPPTQPQGSNPLPEPSHRI--VTRSQNNIHCPKQFPDFKTSFHVTKHPLPXSLE 896

Query: 158  PTCFSQANKCP-----LQDEINAMIRTNTWTLVPRTSTMNIIGCRWIFKLKRDSLGNVVR 322
            PT  SQA K P     + DE+ A+ R  TW LVP  S  NI+GC+W+F++KR+  G++ R
Sbjct: 897  PTTASQALKDPKWCAXMDDELAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSISR 956

Query: 323  HRARLVAKGNHQQEGVDYFDT 385
            ++ARLVAKG HQ+ GVDY DT
Sbjct: 957  YKARLVAKGFHQRPGVDYHDT 977



 Score = 22.3 bits (46), Expect(2) = 2e-18
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 385  FSPVVKHYTICILLSL 432
            FSPVVK  TI ++LS+
Sbjct: 978  FSPVVKPTTIRVVLSI 993


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
 Frame = +2

Query: 2   TPTTALVPHQSSTQVPPPSLNTYRLRSSTNSLKPTNPYDPFAYMITAHSLTE--PTCFSQ 175
           T +  + P   S  +  PSL+    RS   ++KP    D   Y+ T+ S ++  PT  SQ
Sbjct: 438 TASRPVSPFILSPPISVPSLHPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQ 497

Query: 176 ANKCP-----LQDEINAMIRTNTWTLVPRTSTMNIIGCRWIFKLKRDSLGNVVRHRARLV 340
           A K P     + +E  A++R NTWTLVP   +MN+I  +WIF++K +S G + R++ARLV
Sbjct: 498 ALKNPNWHTTMVEEYQALVRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLV 557

Query: 341 AKGNHQQEGVDYFDT 385
           AKG  Q  GV++ DT
Sbjct: 558 AKGFQQYAGVEFTDT 572


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 85.9 bits (211), Expect(2) = 1e-16
 Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 21/149 (14%)
 Frame = +2

Query: 2    TPTTALVPHQSSTQVP-----PPSLNTYRL-----------RSSTNSLKPTNPYDPFAYM 133
            +P T   PH SST +P     PP L++  +           RS     KP   Y   + +
Sbjct: 809  SPITHTDPH-SSTSLPTNNPIPPLLSSPLVSQVQNHGDIVTRSKHGISKPNPKYAMHSTL 867

Query: 134  ITAHSLTEPTCFSQANKCP-----LQDEINAMIRTNTWTLVPRTSTMNIIGCRWIFKLKR 298
            +      EPTC++QA K P     +  E  A+ +  TW LVP +S MNI+  +W+F++K+
Sbjct: 868  LALP--LEPTCYTQAAKYPEWREAMDHEFKALQQAGTWFLVPPSSLMNILPNKWVFRIKK 925

Query: 299  DSLGNVVRHRARLVAKGNHQQEGVDYFDT 385
             S G+V R++ARLVA G HQQEG+DY +T
Sbjct: 926  RSDGSVERYKARLVANGFHQQEGLDYTET 954



 Score = 25.4 bits (54), Expect(2) = 1e-16
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 385  FSPVVKHYTICILLSL 432
            FSPVVKH TI ++L+L
Sbjct: 955  FSPVVKHSTIRLVLAL 970


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