BLASTX nr result

ID: Lithospermum22_contig00039033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039033
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21471.3| unnamed protein product [Vitis vinifera]               55   6e-06

>emb|CBI21471.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
 Frame = +3

Query: 90  MLRRPILQLSTRRLVEKIPVQITS-QIPSYLSSRKPFSATSQ----QPKGAPGKQSDSGN 254
           MLRR +L++S+R+   ++P +ITS QIP + SSRK FSA SQ    Q  G+ GK S+SG+
Sbjct: 1   MLRRSVLEISSRKYYARVPRRITSQQIPPFFSSRKEFSAASQQNTSQGSGSTGKPSNSGS 60

Query: 255 PYGKVXXXXXXXXXXXXXXYH--YASKEPLKSSHNPYEPVNS 374
              K               Y   Y  +  +K  H+  EP  +
Sbjct: 61  FMSKFIVGGVVIGAAVMTAYQTGYLDQIIVKEPHSSSEPTRT 102


Top