BLASTX nr result

ID: Lithospermum22_contig00039026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039026
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3...   121   7e-26
emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]   121   7e-26
gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]          119   3e-25
gb|ABB77430.1| non-S-locus F-box protein 23, partial [Petunia in...   115   5e-24
ref|XP_004147232.1| PREDICTED: F-box protein At5g39250-like [Cuc...   112   4e-23

>ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3 [Vitis vinifera]
           gi|225451701|ref|XP_002279074.1| PREDICTED: F-box
           protein At5g39250 isoform 2 [Vitis vinifera]
           gi|225451703|ref|XP_002279063.1| PREDICTED: F-box
           protein At5g39250 isoform 1 [Vitis vinifera]
           gi|296082222|emb|CBI21227.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   PEYKMTLPVEPRFTIPLIQTVTVSVLVGRKDSNKVACIMKNSVCDYIDRTAHRALAFDYL 182
           PEYKMTL VEPRFT+PL+ TV+VSVLVGRKDS KVACI+  S+ DYIDRTA+RALAFDYL
Sbjct: 132 PEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRTAYRALAFDYL 191

Query: 183 DFSPMYPFVSG 215
           DFSP+YPF+SG
Sbjct: 192 DFSPIYPFISG 202


>emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]
          Length = 239

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   PEYKMTLPVEPRFTIPLIQTVTVSVLVGRKDSNKVACIMKNSVCDYIDRTAHRALAFDYL 182
           PEYKMTL VEPRFT+PL+ TV+VSVLVGRKDS KVACI+  S+ DYIDRTA+RALAFDYL
Sbjct: 122 PEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRTAYRALAFDYL 181

Query: 183 DFSPMYPFVSG 215
           DFSP+YPF+SG
Sbjct: 182 DFSPIYPFISG 192


>gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]
          Length = 250

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/72 (83%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   PEYKMTLPVEPRFTIPLIQTVTVSVLVGRKDSNKVACIMKNSVCDYIDRTAHRALAFDYL 182
           PEYKMTLPVEPRFTIPL QTV+VSVLVGRKD+NKVACI+K S+ DYIDRTA+RALA+DYL
Sbjct: 132 PEYKMTLPVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDRTAYRALAYDYL 191

Query: 183 DF-SPMYPFVSG 215
           DF SPM  FVSG
Sbjct: 192 DFSSPMCLFVSG 203


>gb|ABB77430.1| non-S-locus F-box protein 23, partial [Petunia integrifolia subsp.
           inflata]
          Length = 220

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/72 (80%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   PEYKMTLPVEPRFTIPLIQTVTVSVLVGRKDSNKVACIMKNSVCDYIDRTAHRALAFDYL 182
           PEYKMTLPVEPRFTIPL QTV+VSVLVGRKD+NKVACI+K S+ DYIDRTA+RALA+DYL
Sbjct: 137 PEYKMTLPVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDRTAYRALAYDYL 196

Query: 183 DF-SPMYPFVSG 215
           D  SP+  FVSG
Sbjct: 197 DLASPICLFVSG 208


>ref|XP_004147232.1| PREDICTED: F-box protein At5g39250-like [Cucumis sativus]
           gi|449518705|ref|XP_004166377.1| PREDICTED: F-box
           protein At5g39250-like [Cucumis sativus]
          Length = 249

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = +3

Query: 3   PEYKMTLPVEPRFTIPLIQTVTVSVLVGRKDSNKVACIMKNSVCDYIDRTAHRALAFDYL 182
           PE+KMTL VEPRF+IP+  TV+ SVLVGRKDSNKVA I+  SV DYIDRT++RALAFDYL
Sbjct: 132 PEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDRTSYRALAFDYL 191

Query: 183 DFSPMYPFVSG 215
           DFSP +PFVSG
Sbjct: 192 DFSPFHPFVSG 202


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