BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00039023
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]   371   e-101
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,...   353   2e-95
ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|2...   337   1e-90
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ...   335   9e-90
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...   333   2e-89

>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  371 bits (953), Expect = e-101
 Identities = 183/259 (70%), Positives = 214/259 (82%), Gaps = 1/259 (0%)
 Frame = -2

Query: 775  GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
            GKSVHGC LK+ YE+D YV  ALL++YT+SGDI DAR  F EIPK DVIPWSFMIARY+Q
Sbjct: 259  GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQ 318

Query: 595  SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
            SD+ +EA+E+F  MR+ALVLPNQFTFASVLQACA++E L LG QIH  V+K+GL  DVFV
Sbjct: 319  SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 378

Query: 415  SNALMDVYAKCGEMDESENIFMESENNNEVS-WNTVIVGHVHSGDSCKALHIFMNMLENQ 239
            SNALMDVYAKCG M+ S  +F ES + N+V+ WNTVIVGHV  GD  KAL +F+NMLE +
Sbjct: 379  SNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYR 438

Query: 238  VQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDAR 59
            VQ TEVTYSS LRACAS+AALEPG+QIHSLT+K+ +D D  V NALIDMYAKCGSI+DAR
Sbjct: 439  VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDAR 498

Query: 58   QVFEATNKQDVISWNAMIS 2
             VF+  NKQD +SWNAMIS
Sbjct: 499  LVFDLMNKQDEVSWNAMIS 517



 Score =  185 bits (470), Expect = 8e-45
 Identities = 95/258 (36%), Positives = 153/258 (59%), Gaps = 1/258 (0%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           G  +H C+ K  +E + +V TAL++ Y+  G +  AR VF+ I   D++ W+ M+  +++
Sbjct: 158 GWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAE 217

Query: 595 SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
           +D  +EA++LF  MR     PN FTFASV +AC  +EA  +G  +H   LK    LD++V
Sbjct: 218 NDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYV 277

Query: 415 SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
             AL+D+Y K G++D++   F E    + + W+ +I  +  S  S +A+ +F  M +  V
Sbjct: 278 GVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALV 337

Query: 235 QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQ 56
            P + T++SVL+ACA++  L  G QIH   IK     D  V NAL+D+YAKCG + ++  
Sbjct: 338 LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMX 397

Query: 55  VF-EATNKQDVISWNAMI 5
           +F E+ ++ DV  WN +I
Sbjct: 398 LFAESPHRNDVTPWNTVI 415



 Score =  157 bits (397), Expect = 2e-36
 Identities = 89/258 (34%), Positives = 142/258 (55%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           GK +H  +LK    +D +    LL MY +S  + DA  +F+E+P+ + I +  +I  Y++
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 595 SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
           S R  EAIELF+ + +     N F F ++L+   S++  +LG  IH+ + K+G   + FV
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176

Query: 415 SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
             AL+D Y+ CG +D +  +F      + VSW  ++     +    +AL +F  M     
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 235 QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQ 56
           +P   T++SV +AC  + A + G  +H   +KS Y+LD  V  AL+D+Y K G I DAR 
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARX 296

Query: 55  VFEATNKQDVISWNAMIS 2
            FE   K+DVI W+ MI+
Sbjct: 297 AFEEIPKKDVIPWSFMIA 314



 Score =  125 bits (313), Expect = 1e-26
 Identities = 63/170 (37%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
 Frame = -2

Query: 784 IHTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIP-KDDVIPWSFMIA 608
           ++ G  +H  V+K     D +VS AL+++Y + G ++++  +F E P ++DV PW+ +I 
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV 416

Query: 607 RYSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLIL 428
            + Q    E+A+ LFL+M +  V   + T++S L+ACAS+ AL+ G+QIHS  +K     
Sbjct: 417 GHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK 476

Query: 427 DVFVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSC 278
           D+ V+NAL+D+YAKCG + ++  +F      +EVSWN +I G+   G +C
Sbjct: 477 DIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLAC 526



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 51/177 (28%), Positives = 93/177 (52%)
 Frame = -2

Query: 532 NQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFVSNALMDVYAKCGEMDESENIF 353
           N   +A+ LQ C   +    G  +H  +LK G  LD+F  N L+++Y K   + ++  +F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 352 MESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQVQPTEVTYSSVLRACASIAALE 173
            E    N +S+ T+I G+  S    +A+ +F+ +     +     ++++L+   S+   E
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGE 156

Query: 172 PGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQVFEATNKQDVISWNAMIS 2
            G  IH+   K  ++ +A V  ALID Y+ CG +  AR+VF+    +D++SW  M++
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213


>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 716

 Score =  353 bits (906), Expect = 2e-95
 Identities = 176/258 (68%), Positives = 210/258 (81%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           GKSVHGCVLKT YEMD YV   LL++YT+ GD  D   VF E+PK DVIPWSFMI+RY+Q
Sbjct: 161 GKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ 220

Query: 595 SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
           S++  EA+ELF  MR+A VLPNQFTFASVLQ+CASIE L+LG Q+H  VLKVGL  +VFV
Sbjct: 221 SNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFV 280

Query: 415 SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
           SNALMDVYAKCG +D S  +FME  N NEV+WNT+IVG+V SGD  KAL ++ NMLE QV
Sbjct: 281 SNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQV 340

Query: 235 QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQ 56
           Q +EVTYSSVLRACAS+AA+E G QIHSL++K++YD D  V NALIDMYAKCGSI++AR 
Sbjct: 341 QASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARL 400

Query: 55  VFEATNKQDVISWNAMIS 2
           VF+  +++D ISWNAMIS
Sbjct: 401 VFDMLSERDEISWNAMIS 418



 Score =  186 bits (472), Expect = 5e-45
 Identities = 90/255 (35%), Positives = 154/255 (60%)
 Frame = -2

Query: 769 SVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQSD 590
           S+H C+ K  +E + +V TAL++ Y   G +  AR  F+ I   D++ W+ M+A Y+++D
Sbjct: 62  SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121

Query: 589 RCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFVSN 410
           R +++++LF +MR     PN FTFA VL+AC  +EA  +G  +H  VLK    +D++V  
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181

Query: 409 ALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQVQP 230
            L+D+Y K G+ ++   +F E   ++ + W+ +I  +  S  S +A+ +F  M    V P
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241

Query: 229 TEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQVF 50
            + T++SVL++CASI  L+ G Q+H   +K   D +  V NAL+D+YAKCG + ++ ++F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301

Query: 49  EATNKQDVISWNAMI 5
                ++ ++WN MI
Sbjct: 302 MELPNRNEVTWNTMI 316



 Score =  145 bits (367), Expect = 7e-33
 Identities = 76/206 (36%), Positives = 124/206 (60%)
 Frame = -2

Query: 784 IHTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIAR 605
           +  GK VH  VLK   + + +VS AL+++Y + G + ++  +F E+P  + + W+ MI  
Sbjct: 259 LQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVG 318

Query: 604 YSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILD 425
           Y QS   ++A+ L+ +M +  V  ++ T++SVL+ACAS+ A++LG QIHS  LK     D
Sbjct: 319 YVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKD 378

Query: 424 VFVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLE 245
           V V NAL+D+YAKCG +  +  +F      +E+SWN +I G+   G   +AL  F  M E
Sbjct: 379 VVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQE 438

Query: 244 NQVQPTEVTYSSVLRACASIAALEPG 167
            +  P ++T+ S+L AC++   L+ G
Sbjct: 439 TECVPNKLTFVSILSACSNAGLLDIG 464



 Score =  122 bits (305), Expect = 1e-25
 Identities = 64/216 (29%), Positives = 109/216 (50%)
 Frame = -2

Query: 649 IPKDDVIPWSFMIARYSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLG 470
           +P  + + +  +I  Y QS + +E ++LF  + +     N F F ++L+   S+E  +L 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 469 MQIHSFVLKVGLILDVFVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHS 290
             +H+ + K+G   + FV  AL+D YA CG ++ +   F      + VSW  ++  +  +
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 289 GDSCKALHIFMNMLENQVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVV 110
                +L +F  M      P   T++ VL+AC  + A   G  +H   +K+ Y++D  V 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 109 NALIDMYAKCGSIRDARQVFEATNKQDVISWNAMIS 2
             L+D+Y K G   D  +VFE   K DVI W+ MIS
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMIS 216


>ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|222842084|gb|EEE79631.1|
            predicted protein [Populus trichocarpa]
          Length = 820

 Score =  337 bits (865), Expect = 1e-90
 Identities = 167/260 (64%), Positives = 207/260 (79%)
 Frame = -2

Query: 781  HTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARY 602
            + GK+VHGC  KT Y  + +V   L+++Y +SGD+ DA  VF E+PKDDVIPWSFMIARY
Sbjct: 263  NVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARY 322

Query: 601  SQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDV 422
            +QS++ EEAIE+F  MR+ LVLPNQFT AS+LQACAS+  L+LG QIH  V+KVGL ++V
Sbjct: 323  AQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNV 382

Query: 421  FVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLEN 242
            FVSNALMD+YAKCG M+ S  +F ES N  +VSWNTVIVG+V +G+  KAL +F +MLE 
Sbjct: 383  FVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLEC 442

Query: 241  QVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDA 62
            QVQ TEVTYSSVLRACA IAALEPG QIHSL++K++YD +  V NALIDMYAKCG+I+DA
Sbjct: 443  QVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA 502

Query: 61   RQVFEATNKQDVISWNAMIS 2
            R VF+   + D +SWNAMIS
Sbjct: 503  RLVFDMLREHDQVSWNAMIS 522



 Score =  187 bits (475), Expect = 2e-45
 Identities = 95/257 (36%), Positives = 153/257 (59%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           G SVH CV K  ++ D +V TAL++ Y+  G  + AR VF+ I   D++ W+ M+A Y +
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223

Query: 595 SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
           ++  EE+++LF  MR     PN FTFASVL+AC  +E   +G  +H    K   + ++FV
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283

Query: 415 SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
              L+D+Y K G++D++  +F E   ++ + W+ +I  +  S  S +A+ +F  M    V
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343

Query: 235 QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQ 56
            P + T +S+L+ACAS+  L+ G QIH   +K   D++  V NAL+DMYAKCG + ++ Q
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQ 403

Query: 55  VFEATNKQDVISWNAMI 5
           +F  +     +SWN +I
Sbjct: 404 LFSESPNCTDVSWNTVI 420



 Score =  149 bits (377), Expect = 5e-34
 Identities = 86/264 (32%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
 Frame = -2

Query: 784  IHTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIAR 605
            +  G  +H  V+K   +M+ +VS AL++MY + G ++++  +F+E P    + W+ +I  
Sbjct: 363  LQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVG 422

Query: 604  YSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILD 425
            Y Q+   E+A+ LF DM +  V   + T++SVL+ACA I AL+ G QIHS  +K     +
Sbjct: 423  YVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKN 482

Query: 424  VFVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLE 245
              V NAL+D+YAKCG + ++  +F     +++VSWN +I G+   G   +AL  F +MLE
Sbjct: 483  TVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLE 542

Query: 244  NQVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLD--AAVVNALIDMYAKCGSI 71
             + +P +VT+  +L AC++   L+ G Q +  ++   YD++  A     ++ +  + G +
Sbjct: 543  TECKPDKVTFVGILSACSNAGLLDRG-QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHL 601

Query: 70   -RDARQVFEATNKQDVISWNAMIS 2
             + A+ V E   +  V+ W A++S
Sbjct: 602  DKAAKLVHEIPFEPSVMVWRALLS 625



 Score =  148 bits (373), Expect = 1e-33
 Identities = 87/259 (33%), Positives = 135/259 (52%)
 Frame = -2

Query: 778 TGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYS 599
           TGK +H  ++K    +D + +  LL  Y +   + DA  +F+E+P  + + +  +I  YS
Sbjct: 62  TGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYS 121

Query: 598 QSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVF 419
           Q  R  EAI LF  ++      N F F++VL+   S E  KLG  +H+ V K+G   D F
Sbjct: 122 QCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181

Query: 418 VSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQ 239
           V  AL+D Y+ CG  + +  +F   E  + VSW  ++  +V +    ++L +F  M    
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241

Query: 238 VQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDAR 59
            +P   T++SVL+AC  +     G  +H    K+ Y  +  V   LID+Y K G + DA 
Sbjct: 242 FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301

Query: 58  QVFEATNKQDVISWNAMIS 2
           QVFE   K DVI W+ MI+
Sbjct: 302 QVFEEMPKDDVIPWSFMIA 320



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 54/177 (30%), Positives = 92/177 (51%)
 Frame = -2

Query: 532 NQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFVSNALMDVYAKCGEMDESENIF 353
           N + + S+LQ+C        G  +H  ++K G  LD+F +N L++ Y K   + ++  +F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 352 MESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQVQPTEVTYSSVLRACASIAALE 173
            E  + N VS+ T+I G+       +A+ +F  +     +     +S+VL+   S    +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 172 PGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQVFEATNKQDVISWNAMIS 2
            G  +H+   K  +D DA V  ALID Y+ CG    ARQVF+A   +D++SW  M++
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219


>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519143|gb|AET00767.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  335 bits (858), Expect = 9e-90
 Identities = 164/259 (63%), Positives = 207/259 (79%)
 Frame = -2

Query: 781  HTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARY 602
            + GKSVHGC LK  Y+ D +V  ALLE+Y +SG+I DA+ +F E+PK D+IPWS MIARY
Sbjct: 254  NVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARY 313

Query: 601  SQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDV 422
            +QSDR +EA++LFL MR+  V+PN FTFASVLQACAS  +L LG QIHS VLK GL  +V
Sbjct: 314  AQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNV 373

Query: 421  FVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLEN 242
            FVSNA+MDVYAKCGE++ S  +F E  + N+V+WNT+IVG+V  GD  +A+++F +MLE+
Sbjct: 374  FVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEH 433

Query: 241  QVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDA 62
             +QPTEVTYSSVLRA AS+AALEPG+QIHSLTIK++Y+ D  V N+LIDMYAKCG I DA
Sbjct: 434  DMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDA 493

Query: 61   RQVFEATNKQDVISWNAMI 5
            R  F+  NK+D +SWNAMI
Sbjct: 494  RLTFDKMNKRDEVSWNAMI 512



 Score =  183 bits (465), Expect = 3e-44
 Identities = 92/259 (35%), Positives = 157/259 (60%)
 Frame = -2

Query: 781 HTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARY 602
           H   ++H CV K  +  D +V TAL++ Y+  G++  AR VF++I   D++ W+ M+A Y
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212

Query: 601 SQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDV 422
           +++   EE+++LF  MR     PN FT +  L++C  +EA  +G  +H   LK     D+
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDL 272

Query: 421 FVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLEN 242
           FV  AL+++YAK GE+ +++ +F E    + + W+ +I  +  S  S +AL +F+ M + 
Sbjct: 273 FVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332

Query: 241 QVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDA 62
            V P   T++SVL+ACAS  +L+ G QIHS  +K   + +  V NA++D+YAKCG I ++
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392

Query: 61  RQVFEATNKQDVISWNAMI 5
            ++FE    ++ ++WN +I
Sbjct: 393 MKLFEELPDRNDVTWNTII 411



 Score =  154 bits (388), Expect = 3e-35
 Identities = 83/260 (31%), Positives = 148/260 (56%), Gaps = 3/260 (1%)
 Frame = -2

Query: 775  GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
            GK +H CVLK     + +VS A++++Y + G+I+++  +F E+P  + + W+ +I  Y Q
Sbjct: 357  GKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQ 416

Query: 595  SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
                E A+ LF  M +  + P + T++SVL+A AS+ AL+ G+QIHS  +K     D  V
Sbjct: 417  LGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV 476

Query: 415  SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
            +N+L+D+YAKCG ++++   F +    +EVSWN +I G+   G S +AL++F  M     
Sbjct: 477  ANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDC 536

Query: 235  QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAV--VNALIDMYAKCGSIRDA 62
            +P ++T+  VL AC++   L  G Q H  ++   YD+   +     ++ +  + G   +A
Sbjct: 537  KPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEA 595

Query: 61   RQVF-EATNKQDVISWNAMI 5
             ++  E   +  V+ W A++
Sbjct: 596  MKLIGEIAYQPSVMVWRALL 615



 Score =  137 bits (345), Expect = 3e-30
 Identities = 77/258 (29%), Positives = 134/258 (51%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           GK +H  +LK    +D +    LL  Y +S  ++DA  +F+E+P+ + I +  +   YS+
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 595 SDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFV 416
             +  +A+   L + K     N F F ++L+   S++   L   +H+ V K+G   D FV
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 415 SNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQV 236
             AL+D Y+  G +D + ++F +    + VSW  ++  +  +    ++L +F  M     
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 235 QPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQ 56
           +P   T S  L++C  + A   G  +H   +K  YD D  V  AL+++YAK G I DA++
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293

Query: 55  VFEATNKQDVISWNAMIS 2
           +FE   K D+I W+ MI+
Sbjct: 294 LFEEMPKTDLIPWSLMIA 311



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 38/105 (36%), Positives = 56/105 (53%)
 Frame = -2

Query: 784 IHTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIAR 605
           +  G  +H   +KT Y  D  V+ +L++MY + G I DAR  F+++ K D + W+ MI  
Sbjct: 455 LEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICG 514

Query: 604 YSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLG 470
           YS      EA+ LF  M+     PN+ TF  VL AC++   L  G
Sbjct: 515 YSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  333 bits (855), Expect = 2e-89
 Identities = 167/258 (64%), Positives = 205/258 (79%), Gaps = 1/258 (0%)
 Frame = -2

Query: 775 GKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQ 596
           GKSVHGC LK  Y+ D YV  ALLE+YT+SG+I +A+  F E+PKDD+IPWS MI+RY+Q
Sbjct: 224 GKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQ 283

Query: 595 SDRCEEAIELFLDMRKA-LVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVF 419
           SD+ +EA+ELF  MR++ +V+PN FTFASVLQACAS+  L LG QIHS VLKVGL  +VF
Sbjct: 284 SDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVF 343

Query: 418 VSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQ 239
           VSNALMDVYAKCGE++ S  +F  S   NEV+WNT+IVG+V  GD  KAL++F NML   
Sbjct: 344 VSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD 403

Query: 238 VQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDAR 59
           +QPTEVTYSSVLRA AS+ ALEPG QIHSLTIK++Y+ D+ V N+LIDMYAKCG I DAR
Sbjct: 404 IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDAR 463

Query: 58  QVFEATNKQDVISWNAMI 5
             F+  +KQD +SWNA+I
Sbjct: 464 LTFDKMDKQDEVSWNALI 481



 Score =  178 bits (452), Expect = 1e-42
 Identities = 93/256 (36%), Positives = 156/256 (60%), Gaps = 1/256 (0%)
 Frame = -2

Query: 769 SVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARYSQSD 590
           SVH  V K  ++ D +V TAL++ Y+  G++  AR VF+ I   D++ W+ M+A Y+++ 
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184

Query: 589 RCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDVFVSN 410
             E+++ LF  MR     PN FT ++ L++C  +EA K+G  +H   LKV    D++V  
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244

Query: 409 ALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQ-VQ 233
           AL+++Y K GE+ E++  F E   ++ + W+ +I  +  S  S +AL +F  M ++  V 
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304

Query: 232 PTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQV 53
           P   T++SVL+ACAS+  L  G QIHS  +K   D +  V NAL+D+YAKCG I ++ ++
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKL 364

Query: 52  FEATNKQDVISWNAMI 5
           F  + +++ ++WN +I
Sbjct: 365 FTGSTEKNEVAWNTII 380



 Score =  145 bits (367), Expect = 7e-33
 Identities = 79/263 (30%), Positives = 151/263 (57%), Gaps = 3/263 (1%)
 Frame = -2

Query: 784  IHTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIAR 605
            ++ G  +H CVLK   + + +VS AL+++Y + G+I+++  +F    + + + W+ +I  
Sbjct: 323  LNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVG 382

Query: 604  YSQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILD 425
            Y Q    E+A+ LF +M    + P + T++SVL+A AS+ AL+ G QIHS  +K     D
Sbjct: 383  YVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKD 442

Query: 424  VFVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLE 245
              V+N+L+D+YAKCG +D++   F + +  +EVSWN +I G+   G   +AL++F  M +
Sbjct: 443  SVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQ 502

Query: 244  NQVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAV--VNALIDMYAKCGSI 71
            +  +P ++T+  VL AC++   L+ G + H  ++   Y ++  +     ++ +  + G  
Sbjct: 503  SNSKPNKLTFVGVLSACSNAGLLDKG-RAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQF 561

Query: 70   RDA-RQVFEATNKQDVISWNAMI 5
             +A + + E   +  V+ W A++
Sbjct: 562  DEAVKLIGEIPFQPSVMVWRALL 584



 Score =  142 bits (358), Expect = 8e-32
 Identities = 78/260 (30%), Positives = 135/260 (51%)
 Frame = -2

Query: 781 HTGKSVHGCVLKTHYEMDPYVSTALLEMYTRSGDIKDARGVFNEIPKDDVIPWSFMIARY 602
           + GKS+H  +LK    +D +    LL  Y   G ++DA  +F+E+P  + + +  +   +
Sbjct: 20  NAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79

Query: 601 SQSDRCEEAIELFLDMRKALVLPNQFTFASVLQACASIEALKLGMQIHSFVLKVGLILDV 422
           S+S + + A  L L + +     NQF F ++L+   S++     + +H++V K+G   D 
Sbjct: 80  SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA 139

Query: 421 FVSNALMDVYAKCGEMDESENIFMESENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLEN 242
           FV  AL+D Y+ CG +D +  +F      + VSW  ++  +  +     +L +F  M   
Sbjct: 140 FVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199

Query: 241 QVQPTEVTYSSVLRACASIAALEPGVQIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDA 62
             +P   T S+ L++C  + A + G  +H   +K  YD D  V  AL+++Y K G I +A
Sbjct: 200 GYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEA 259

Query: 61  RQVFEATNKQDVISWNAMIS 2
           +Q FE   K D+I W+ MIS
Sbjct: 260 QQFFEEMPKDDLIPWSLMIS 279



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 47/174 (27%), Positives = 89/174 (51%)
 Frame = -2

Query: 523 TFASVLQACASIEALKLGMQIHSFVLKVGLILDVFVSNALMDVYAKCGEMDESENIFMES 344
           ++A++LQ          G  +H  +LK G  LD+F  N L++ Y   G ++++  +F E 
Sbjct: 5   SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64

Query: 343 ENNNEVSWNTVIVGHVHSGDSCKALHIFMNMLENQVQPTEVTYSSVLRACASIAALEPGV 164
              N VS+ T+  G   S    +A  + + +     +  +  ++++L+   S+   +  +
Sbjct: 65  PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124

Query: 163 QIHSLTIKSLYDLDAAVVNALIDMYAKCGSIRDARQVFEATNKQDVISWNAMIS 2
            +H+   K  +  DA V  ALID Y+ CG++  ARQVF+    +D++SW  M++
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178