BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038962
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              235   1e-59
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   235   1e-59
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   231   3e-58
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   230   4e-58
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   224   3e-56

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  235 bits (600), Expect = 1e-59
 Identities = 127/269 (47%), Positives = 176/269 (65%), Gaps = 2/269 (0%)
 Frame = +2

Query: 8    ATLKTPQRKPHEVPIKELEHVLFQEFLEARCP-SYAMATAADSWLAFMDKLLSLGDDNSE 184
            +T   P ++P +    ELEH LFQ FL  R   S A+  AAD+WL FMD+LL+L DD S+
Sbjct: 662  STRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSD 721

Query: 185  EKRRLNQKILKLIDLYYDAVDAPKSGNKVVIPDELKAKEYPHYMGKLKFSYQSDSVLGEV 364
            EK  L +K+L+L D+YYDA+DAPKSG KV +  ELKA+++PH+MG+ + SY S S+LG++
Sbjct: 722  EKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGR-ESSYHSTSILGQI 780

Query: 365  YDSAVRFIQNGQQPKIEIQKLPCFDV-VLHEDYLNLWRTRYNKYRFDMKKALSSTDREVN 541
            YD+   F    Q  K EI +LP F++  + +  L  W+ RY++YR +M  AL     E  
Sbjct: 781  YDAVESFQPENQSTK-EIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGG-ETK 838

Query: 542  NASAAVVIRKYKEMLYDADEFHNSIKNLKEIYDEALAIYHVTYDHAKSQGDVTKCGFAWK 721
            +  AA VI KYK++LY A EF  S +NL++I+DEALAIYHVTY+   +   V+ C F W+
Sbjct: 839  DEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWR 898

Query: 722  VAGPVLCSLYIRKQGENPLACSPAALRKI 808
            VAG  LC LY  K GE  + C P+ LR++
Sbjct: 899  VAGRALCKLYTVKLGEKSMVCVPSVLRQV 927


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  235 bits (600), Expect = 1e-59
 Identities = 127/269 (47%), Positives = 176/269 (65%), Gaps = 2/269 (0%)
 Frame = +2

Query: 8    ATLKTPQRKPHEVPIKELEHVLFQEFLEARCP-SYAMATAADSWLAFMDKLLSLGDDNSE 184
            +T   P ++P +    ELEH LFQ FL  R   S A+  AAD+WL FMD+LL+L DD S+
Sbjct: 676  STRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSD 735

Query: 185  EKRRLNQKILKLIDLYYDAVDAPKSGNKVVIPDELKAKEYPHYMGKLKFSYQSDSVLGEV 364
            EK  L +K+L+L D+YYDA+DAPKSG KV +  ELKA+++PH+MG+ + SY S S+LG++
Sbjct: 736  EKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGR-ESSYHSTSILGQI 794

Query: 365  YDSAVRFIQNGQQPKIEIQKLPCFDV-VLHEDYLNLWRTRYNKYRFDMKKALSSTDREVN 541
            YD+   F    Q  K EI +LP F++  + +  L  W+ RY++YR +M  AL     E  
Sbjct: 795  YDAVESFQPENQSTK-EIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGG-ETK 852

Query: 542  NASAAVVIRKYKEMLYDADEFHNSIKNLKEIYDEALAIYHVTYDHAKSQGDVTKCGFAWK 721
            +  AA VI KYK++LY A EF  S +NL++I+DEALAIYHVTY+   +   V+ C F W+
Sbjct: 853  DEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWR 912

Query: 722  VAGPVLCSLYIRKQGENPLACSPAALRKI 808
            VAG  LC LY  K GE  + C P+ LR++
Sbjct: 913  VAGRALCKLYTVKLGEKSMVCVPSVLRQV 941


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  231 bits (588), Expect = 3e-58
 Identities = 124/271 (45%), Positives = 178/271 (65%), Gaps = 3/271 (1%)
 Frame = +2

Query: 5    SATLKTPQRKPHEVPIKELEHVLFQEFLEARC-PSYAMATAADSWLAFMDKLLSLGD-DN 178
            S  L +  +KP E   +ELE  LF+ FL+ R  PSYAM  + +SW+A MD+LL+L +  N
Sbjct: 683  SVPLDSSVKKPSEFSPEELEEELFRLFLKTRFQPSYAMGMSENSWMALMDRLLTLNNCTN 742

Query: 179  SEEKRRLNQKILKLIDLYYDAVDAPKSGNKVVIPDELKAKEYPHYMGKLKFSYQSDSVLG 358
              EK R+ + +LKLID+YY+A+DAPKSG KV +P++L A+ +PHYM K K S+ S S+LG
Sbjct: 743  ENEKERVKENMLKLIDIYYEALDAPKSGRKVQVPNDLIAELFPHYMEKDK-SFTSTSILG 801

Query: 359  EVYDSAVRFIQNGQQPKIEIQKLPCFDVVLHEDYLNLWRTRYNKYRFDMKKALSSTDREV 538
             +YD    +++N      EI KLPCFDV +    L  W+T+Y +YR DM  AL+  D+  
Sbjct: 802  LIYDEVEIWLENDMVG--EIWKLPCFDVEVPPSCLEKWKTKYEEYRKDMTDALNLKDKSK 859

Query: 539  NNASAAVVIRKYKEMLYDAD-EFHNSIKNLKEIYDEALAIYHVTYDHAKSQGDVTKCGFA 715
            ++  AA V RKYKE  Y    E    +K++ +I++EALA+Y+V+Y++A  + +V +CGFA
Sbjct: 860  SHEEAAEVNRKYKEEFYGPTLEMEGCLKSIGDIFNEALAVYNVSYEYAMLKKEVKRCGFA 919

Query: 716  WKVAGPVLCSLYIRKQGENPLACSPAALRKI 808
            WK+AG  L  LYI KQ E  L C P+ +R+I
Sbjct: 920  WKIAGSALTRLYIIKQNEKALNCDPSVVREI 950


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  230 bits (587), Expect = 4e-58
 Identities = 124/262 (47%), Positives = 167/262 (63%), Gaps = 2/262 (0%)
 Frame = +2

Query: 29   RKPHEVPIKELEHVLFQEFLEARC-PSYAMATAADSWLAFMDKLLSLGDDNSEEKRRLNQ 205
            +KP E    ELE+ LF+ FL  R  PSYA + AAD+WLA MD+ L LG++  EE+  +  
Sbjct: 797  KKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRA 856

Query: 206  KILKLIDLYYDAVDAP-KSGNKVVIPDELKAKEYPHYMGKLKFSYQSDSVLGEVYDSAVR 382
            KIL+LI++YYDA+DAP K G K+ +P  LKA   PH+M + K SY S S+LG+++D+A  
Sbjct: 857  KILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANM 916

Query: 383  FIQNGQQPKIEIQKLPCFDVVLHEDYLNLWRTRYNKYRFDMKKALSSTDREVNNASAAVV 562
            + +  + P IE+QKLPCF+  L E     W+  Y  YR DM  A+   D +  N +A   
Sbjct: 917  YQE--EVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAM-QLDPDAKNIAAEAT 973

Query: 563  IRKYKEMLYDADEFHNSIKNLKEIYDEALAIYHVTYDHAKSQGDVTKCGFAWKVAGPVLC 742
            I+KYKE+LY A+E   S ++ +E+Y EALAIY VTYDHA S+  V  CGFAWKVAG  L 
Sbjct: 974  IKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALF 1032

Query: 743  SLYIRKQGENPLACSPAALRKI 808
             LY  K  E    C P+ +R+I
Sbjct: 1033 KLYAIKHSERSFHCLPSVMREI 1054


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  224 bits (571), Expect = 3e-56
 Identities = 122/268 (45%), Positives = 168/268 (62%), Gaps = 1/268 (0%)
 Frame = +2

Query: 8    ATLKTPQRKPHEVPIKELEHVLFQEFLEARCP-SYAMATAADSWLAFMDKLLSLGDDNSE 184
            +T   P ++P +    ELEH LFQ FL  R   S A+  AAD+WL FMD+LL+L DD S+
Sbjct: 945  STRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSD 1004

Query: 185  EKRRLNQKILKLIDLYYDAVDAPKSGNKVVIPDELKAKEYPHYMGKLKFSYQSDSVLGEV 364
            EK  L +K+L+L D+YYDA+DAPKSG KV +  ELKA+++PH+MG+ + SY S S+LG++
Sbjct: 1005 EKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGR-ESSYHSTSILGQI 1063

Query: 365  YDSAVRFIQNGQQPKIEIQKLPCFDVVLHEDYLNLWRTRYNKYRFDMKKALSSTDREVNN 544
            YD+   F    Q  K  + +            L  W+ RY++YR +M  AL     E  +
Sbjct: 1064 YDAVESFQPENQSTKDAVPQA----------CLRSWKDRYDQYRSEMAAALQHGG-ETKD 1112

Query: 545  ASAAVVIRKYKEMLYDADEFHNSIKNLKEIYDEALAIYHVTYDHAKSQGDVTKCGFAWKV 724
              AA VI KYK++LY A EF  S + L++I+DEALAIYHVTY+ A +   V+ C F W+V
Sbjct: 1113 EYAAEVINKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFAINGARVSYCNFPWRV 1172

Query: 725  AGPVLCSLYIRKQGENPLACSPAALRKI 808
            AG  LC LY  K GE  + C P+ LR++
Sbjct: 1173 AGRALCKLYTVKLGEKSMVCVPSVLRQV 1200