BLASTX nr result

ID: Lithospermum22_contig00038901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038901
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511046.1| pentatricopeptide repeat-containing protein,...   132   4e-29
ref|XP_002326848.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002302503.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002526480.1| pentatricopeptide repeat-containing protein,...   125   4e-27
ref|XP_003590102.1| hypothetical protein MTR_1g044340 [Medicago ...   122   3e-26

>ref|XP_002511046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550161|gb|EEF51648.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 360

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/95 (64%), Positives = 75/95 (78%)
 Frame = +1

Query: 1   VRSSNKTIALFDEWYRRKEVSQGLKEQDVLLFMMREGMFRTLGLNVKFLDTRYFSGFCEL 180
           +RS+NKTI LFD WY RK+ S G KEQDVL  MMR+G+FR LGL V+FLDT YFSGFC+ 
Sbjct: 241 IRSNNKTIELFDSWYARKDRSVGQKEQDVLDSMMRQGVFRNLGLRVRFLDTLYFSGFCQD 300

Query: 181 TKDFDAVTTVHSNCCRTINAKLLDLTTVTNKWREY 285
           + D  AVTTVH+NCCRTI+AK+ DLT V  +W+ +
Sbjct: 301 SGDIRAVTTVHANCCRTISAKIADLTAVLRQWKSF 335


>ref|XP_002326848.1| predicted protein [Populus trichocarpa] gi|222835163|gb|EEE73598.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/95 (61%), Positives = 72/95 (75%)
 Frame = +1

Query: 1   VRSSNKTIALFDEWYRRKEVSQGLKEQDVLLFMMREGMFRTLGLNVKFLDTRYFSGFCEL 180
           +RS+NKT++LFD WY RK+ S G KEQDV   +M EGMF  LGL  +FLDT YFSGFCE 
Sbjct: 179 IRSNNKTVSLFDAWYGRKDNSTGKKEQDVFFDLMDEGMFGQLGLQARFLDTVYFSGFCED 238

Query: 181 TKDFDAVTTVHSNCCRTINAKLLDLTTVTNKWREY 285
           +KD  AV TVH+NCCR+INAK+ DLT V   W+++
Sbjct: 239 SKDIKAVITVHANCCRSINAKIKDLTAVLRDWKKF 273


>ref|XP_002302503.1| predicted protein [Populus trichocarpa] gi|222844229|gb|EEE81776.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/95 (61%), Positives = 73/95 (76%)
 Frame = +1

Query: 1   VRSSNKTIALFDEWYRRKEVSQGLKEQDVLLFMMREGMFRTLGLNVKFLDTRYFSGFCEL 180
           +RS+NKTI+LFD WY RK+ S G KEQDVL  +M+ GMF  LGL  +FLDT YFSGFC  
Sbjct: 181 IRSNNKTISLFDAWYGRKDNSTGKKEQDVLFDIMKAGMFGQLGLQARFLDTVYFSGFCTD 240

Query: 181 TKDFDAVTTVHSNCCRTINAKLLDLTTVTNKWREY 285
           +KD +AV TVH+NCCR+INAK+ DLT V   W+++
Sbjct: 241 SKDINAVITVHANCCRSINAKVKDLTAVLRDWKKF 275


>ref|XP_002526480.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534155|gb|EEF35871.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 357

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/95 (62%), Positives = 72/95 (75%)
 Frame = +1

Query: 1   VRSSNKTIALFDEWYRRKEVSQGLKEQDVLLFMMREGMFRTLGLNVKFLDTRYFSGFCEL 180
           V+S+NKTIALF+ WY RK+ S G KEQDVL  +MREG FR L LN +FLDT YFSGFC  
Sbjct: 232 VKSNNKTIALFENWYSRKDNSTGKKEQDVLFDLMREGTFRRLELNARFLDTVYFSGFCTD 291

Query: 181 TKDFDAVTTVHSNCCRTINAKLLDLTTVTNKWREY 285
           ++D  AV TVH+NCCR+I+AK+LDL +V   W  Y
Sbjct: 292 SRDVKAVATVHANCCRSISAKVLDLRSVLRDWMRY 326


>ref|XP_003590102.1| hypothetical protein MTR_1g044340 [Medicago truncatula]
           gi|355479150|gb|AES60353.1| hypothetical protein
           MTR_1g044340 [Medicago truncatula]
          Length = 360

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/95 (58%), Positives = 74/95 (77%)
 Frame = +1

Query: 1   VRSSNKTIALFDEWYRRKEVSQGLKEQDVLLFMMREGMFRTLGLNVKFLDTRYFSGFCEL 180
           VRS+NKTI+LF+ WY +K+ S G KEQDVLL ++R G+   LGL V+FLDT YFSGFC+ 
Sbjct: 233 VRSNNKTISLFETWYGKKDNSTGKKEQDVLLDLIRHGIIGHLGLKVRFLDTLYFSGFCQD 292

Query: 181 TKDFDAVTTVHSNCCRTINAKLLDLTTVTNKWREY 285
           +KDF AVTTVH+NCCR+I AK+ DL    + W+++
Sbjct: 293 SKDFRAVTTVHANCCRSITAKVADLKAALHDWKKF 327


Top