BLASTX nr result

ID: Lithospermum22_contig00038818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038818
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517028.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ...   118   6e-25
emb|CBI26352.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   112   3e-23
ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_002517028.1| conserved hypothetical protein [Ricinus communis]
           gi|223543663|gb|EEF45191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = +2

Query: 20  QEIFSYLFRTFAVMSLPFACMSSSLNKPNPLHLDVSFPSFQDIRWNLARLIYLFNIQLER 199
           Q+    L  TF   S PFAC+S+SLNKP PL LDVSFPSFQD++W+LARL+YLFNIQLER
Sbjct: 3   QDSIPSLVLTFGATSSPFACISNSLNKPTPLGLDVSFPSFQDLKWSLARLLYLFNIQLER 62

Query: 200 NVATFFIVLLVSCMSFVFIG 259
           NVATFF+VLLV+C SFV IG
Sbjct: 63  NVATFFVVLLVACFSFVVIG 82


>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
          Length = 850

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = +2

Query: 20  QEIFSYLFRTFAVMSLPFACMSSSLNKPNPLHLDVSFPSFQDIRWNLARLIYLFNIQLER 199
           Q +  ++F+T +  SLPFAC+S++LNKP PL+LDVS PS  DIRW+LARL+YLFNIQLER
Sbjct: 126 QAVLPHVFQTCSATSLPFACVSNALNKPKPLNLDVSLPSIHDIRWSLARLLYLFNIQLER 185

Query: 200 NVATFFIVLLVSCMSFVFIG 259
           NVATFF+VLL++C SFV IG
Sbjct: 186 NVATFFVVLLLACFSFVVIG 205


>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/84 (67%), Positives = 65/84 (77%)
 Frame = +2

Query: 8   MNFTQEIFSYLFRTFAVMSLPFACMSSSLNKPNPLHLDVSFPSFQDIRWNLARLIYLFNI 187
           M   Q + S +  TF   SLPFACMS+SLNKP PL LDVS PS QDI+WN +RLIYLFNI
Sbjct: 116 MKMVQNLLSVVC-TFGNGSLPFACMSNSLNKPTPLRLDVSLPSLQDIKWNFSRLIYLFNI 174

Query: 188 QLERNVATFFIVLLVSCMSFVFIG 259
           +LERNVAT F+VLLV+C SFV IG
Sbjct: 175 RLERNVATSFVVLLVACFSFVVIG 198


>ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 729

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +2

Query: 47  TFAVMSLPFACMSSSLNKPNPLHLDVSFPSFQDIRWNLARLIYLFNIQLERNVATFFIVL 226
           TF   SLPFACMS+SLNKP PL LDVS PS QDI+WN +RLIYLFNI+LERNVAT F+VL
Sbjct: 11  TFGNGSLPFACMSNSLNKPTPLRLDVSLPSLQDIKWNFSRLIYLFNIRLERNVATSFVVL 70

Query: 227 LVSCMSFVFIG 259
           LV+C SFV IG
Sbjct: 71  LVACFSFVVIG 81


>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = +2

Query: 8   MNFTQEIFSYLFRTFAVMSLPFACMSSSLNKPNPLHLDVSFPSFQDIRWNLARLIYLFNI 187
           +   Q++  +L  TF   + PFACMS+SLNKP PL LDVS P+ QDI+W+L+RL+YLFN+
Sbjct: 15  IKIVQDLLPFLIGTFGATNSPFACMSNSLNKPTPLQLDVSLPALQDIKWSLSRLLYLFNM 74

Query: 188 QLERNVATFFIVLLVSCMSFVFIG 259
           Q+ERNVA  F+VLLVSC SFV IG
Sbjct: 75  QIERNVAMSFVVLLVSCFSFVVIG 98


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