BLASTX nr result

ID: Lithospermum22_contig00038769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038769
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|222868849|gb|EEF05980.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
 Frame = +1

Query: 88  PVKFIASIPFQWEEKPGIPLPCFSPA------TPQRVDIICPLSPPKCSEDDDDSSRVDG 249
           PVK IAS+PF WEEKPG PL CFS +      TPQ   +  P     CS+ DD+  + DG
Sbjct: 69  PVKLIASVPFNWEEKPGKPLSCFSQSPESAFITPQANLLALPWH-VTCSQGDDNHKQEDG 127

Query: 250 CGG 258
             G
Sbjct: 128 DSG 130


Top