BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038713
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    65   6e-09
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    63   2e-08
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-07
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    60   1e-07
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    60   2e-07

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/70 (42%), Positives = 44/70 (62%)
 Frame = +1

Query: 1   EMNRQLTRVITSEEVKRDVFEMPADKSLGLDGMTVLFFQSFWHIVSSDIVKVVDCFFFTS 180
           EMN+ LT+VI+ EEVKR +F +  DK+ G DGMT  F+Q +W +   D++K+V  F  T 
Sbjct: 366 EMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTG 425

Query: 181 KLLHTVNHTH 210
                +N T+
Sbjct: 426 FFDERLNETN 435


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 4   MNRQLTRVITSEEVKRDVFEMPADKSLGLDGMTVLFFQSFWHIVSSDIVKVVDCFFFTSK 183
           MN+ LT+VI+ EEVKR +F +  DK+ G DGMT  F+Q +W +   D++K+V  F  T  
Sbjct: 1   MNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGF 60

Query: 184 LLHTVNHTH 210
               +N T+
Sbjct: 61  FDERLNETN 69


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = +1

Query: 7   NRQLTRVITSEEVKRDVFEMPADKSLGLDGMTVLFFQSFWHIVSSDIVKVVDCFFFTSKL 186
           N  LT  ++ EE+K  VF++  DKS G DG    FFQ +W ++   + + V  FF +  +
Sbjct: 437 NAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYM 496

Query: 187 LHTVNHT 207
           L  VNHT
Sbjct: 497 LKEVNHT 503


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/67 (41%), Positives = 41/67 (61%)
 Frame = +1

Query: 7   NRQLTRVITSEEVKRDVFEMPADKSLGLDGMTVLFFQSFWHIVSSDIVKVVDCFFFTSKL 186
           +R LTRV+T EE+K+ +F MP DKS G DG T  F+++ W I+  +++  +  FF    L
Sbjct: 167 HRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFL 226

Query: 187 LHTVNHT 207
              VN T
Sbjct: 227 PKGVNST 233


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/70 (38%), Positives = 42/70 (60%)
 Frame = +1

Query: 1   EMNRQLTRVITSEEVKRDVFEMPADKSLGLDGMTVLFFQSFWHIVSSDIVKVVDCFFFTS 180
           +MN+ LT+ +  +E+ + VF + A+ + G DG T LFFQ  W +V + I+  ++ FF T 
Sbjct: 148 DMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLVKNQIISDIELFFQTG 207

Query: 181 KLLHTVNHTH 210
            L    NHTH
Sbjct: 208 ILPEDWNHTH 217