BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038706
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|2...   250   2e-64
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi...   242   4e-62
ref|XP_002521253.1| pentatricopeptide repeat-containing protein,...   233   3e-59
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...   216   4e-54
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ...   209   4e-52

>ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|222849164|gb|EEE86711.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  250 bits (638), Expect = 2e-64
 Identities = 119/208 (57%), Positives = 154/208 (74%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2    LEPTARIWGSLLAASRHHRNIELAELAVHKISSLQHENTGSYVLLSNMYAEAGRWEDVER 181
            L PTARIWGSLLAASR+H ++ LAELA   I SL+H+NTG YVLLSNMYAEAGRWEDV+R
Sbjct: 577  LVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDR 636

Query: 182  INYLMKKQGLERNVGWTRIESKGETCQFTNYDQSHAKXXXXXXXXXXXXTKIRE-VSNVD 358
            I YLMK+QGL + VG + ++  G +  F N D+SHA              KI E +    
Sbjct: 637  IKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHS 696

Query: 359  VSRFKPKDRRRQRENHPMFHSVRLAICFGLISSSVGNSILVRKNIRMCEDCHKAVKKISE 538
            +++F+P D  ++R N P +HSV+LAICFGLIS+++GN ++VRKN R+C+DCH+A KKIS+
Sbjct: 697  LTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQ 756

Query: 539  ITNREIVVGDTKIYHHFHNGHCSCGDYW 622
            +T REIVVGD K++HHF +G CSC DYW
Sbjct: 757  VTKREIVVGDAKVFHHFRDGCCSCRDYW 784


>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic [Vitis vinifera]
            gi|297744563|emb|CBI37825.3| unnamed protein product
            [Vitis vinifera]
          Length = 802

 Score =  242 bits (618), Expect = 4e-62
 Identities = 117/208 (56%), Positives = 152/208 (73%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2    LEPTARIWGSLLAASRHHRNIELAELAVHKISSLQHENTGSYVLLSNMYAEAGRWEDVER 181
            L PTARIWGSLL ASR+  ++ELAE+A   I SL+H+NTG YVLLSNMYAEAGRWEDVER
Sbjct: 595  LAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVER 654

Query: 182  INYLMKKQGLERNVGWTRIESKGETCQFTNYDQSHAKXXXXXXXXXXXXTKIREVSNV-D 358
            I + MKK+GLE++VG + ++   +T +F N D+S  +             KI E   V  
Sbjct: 655  IKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHS 714

Query: 359  VSRFKPKDRRRQRENHPMFHSVRLAICFGLISSSVGNSILVRKNIRMCEDCHKAVKKISE 538
            +++F+P D  ++R N    HS+RLAICFGLIS+++GN +LVRKNIR+CE CH+  K+ISE
Sbjct: 715  LTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISE 774

Query: 539  ITNREIVVGDTKIYHHFHNGHCSCGDYW 622
             T REI+V D+KI+HHF+ GHCSCGDYW
Sbjct: 775  TTKREIIVRDSKIFHHFNGGHCSCGDYW 802


>ref|XP_002521253.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539521|gb|EEF41109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 484

 Score =  233 bits (593), Expect = 3e-59
 Identities = 113/208 (54%), Positives = 148/208 (71%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   LEPTARIWGSLLAASRHHRNIELAELAVHKISSLQHENTGSYVLLSNMYAEAGRWEDVER 181
           L PTARIWGSLL ASR+  NI LAELA   I SL+H+NTG YVLLSNMYAEAGRWEDVE+
Sbjct: 277 LVPTARIWGSLLTASRNKNNIALAELAAKHIFSLEHDNTGCYVLLSNMYAEAGRWEDVEQ 336

Query: 182 INYLMKKQGLERNVGWTRIESKGETCQFTNYDQSHAKXXXXXXXXXXXXTKIREVSNV-D 358
           I  LMKK+G+ + V    +E+ G++ +F N D+SH++             KI + + V  
Sbjct: 337 IKTLMKKKGIVKTVSCCMVETNGKSHKFINQDKSHSQINMIYDVLDIIMKKIGKDAYVHS 396

Query: 359 VSRFKPKDRRRQRENHPMFHSVRLAICFGLISSSVGNSILVRKNIRMCEDCHKAVKKISE 538
           VS+F+  D   +R+N P  HSV+LAICFGLIS+++G  +++RK  R+CEDCH   KKIS 
Sbjct: 397 VSKFRLVDLMNKRKNSPANHSVKLAICFGLISTAIGKPVVIRKTTRICEDCHMVAKKISL 456

Query: 539 ITNREIVVGDTKIYHHFHNGHCSCGDYW 622
           +T REI++GD+KI+HHF+ G CSC DYW
Sbjct: 457 VTKREIIIGDSKIFHHFNGGSCSCRDYW 484


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75098809|sp|O49619.1|PP350_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g35130, chloroplastic; Flags: Precursor
            gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
            thaliana] gi|7270464|emb|CAB80230.1| putative protein
            [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 804

 Score =  216 bits (549), Expect = 4e-54
 Identities = 105/207 (50%), Positives = 137/207 (66%), Gaps = 2/207 (0%)
 Frame = +2

Query: 8    PTARIWGSLLAASRHHRNIELAELAVHKISSLQHENTGSYVLLSNMYAEAGRWEDVERIN 187
            PTARIWGSLL ASR+H++I +AE A  +I  ++H+NTG YVLL NMYAEAGRWEDV RI 
Sbjct: 598  PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657

Query: 188  YLMKKQGLERNVGWTRIESKGETCQFTNYDQSHAKXXXXXXXXXXXXTKIRE--VSNVDV 361
             LM+ +G+ R    + +E+KG++  FTN D+SH                + E  +    V
Sbjct: 658  LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCV 717

Query: 362  SRFKPKDRRRQRENHPMFHSVRLAICFGLISSSVGNSILVRKNIRMCEDCHKAVKKISEI 541
            SR +P+   + R N P  HSVRLA CFGLIS+  G  + VR N R+C  CH+ ++K S +
Sbjct: 718  SRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRL 777

Query: 542  TNREIVVGDTKIYHHFHNGHCSCGDYW 622
            T REIVVGD+KI+HHF NG CSCG+YW
Sbjct: 778  TRREIVVGDSKIFHHFSNGRCSCGNYW 804


>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312926|gb|EFH43349.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 803

 Score =  209 bits (532), Expect = 4e-52
 Identities = 103/210 (49%), Positives = 135/210 (64%), Gaps = 5/210 (2%)
 Frame = +2

Query: 8    PTARIWGSLLAASRHHRNIELAELAVHKISSLQHENTGSYVLLSNMYAEAGRWEDVERIN 187
            PTARIWGSLL ASR+H +I +AE A  +I  ++H+NTG YVLL NMYAEA RWEDV RI 
Sbjct: 594  PTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIK 653

Query: 188  YLMKKQGLERNVGWTRIESKGETCQFTNYDQSHAKXXXXXXXXXXXXTKIREVSNVD--- 358
             LM+ +G+ R    + +E+K +T   TN D+SH +              I E    D   
Sbjct: 654  LLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYV 713

Query: 359  --VSRFKPKDRRRQRENHPMFHSVRLAICFGLISSSVGNSILVRKNIRMCEDCHKAVKKI 532
              VS+ + +   + R N P  HSVRLA CFGLIS+  G ++ VR N R+C  CH+ ++K 
Sbjct: 714  HYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKA 773

Query: 533  SEITNREIVVGDTKIYHHFHNGHCSCGDYW 622
            S++T REIVVGD+KI+HHF NG CSCG+YW
Sbjct: 774  SKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803