BLASTX nr result

ID: Lithospermum22_contig00038704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038704
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   155   4e-36
ref|XP_002871739.1| pentatricopeptide repeat-containing protein ...   151   6e-35
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34

>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/98 (74%), Positives = 84/98 (85%)
 Frame = -2

Query: 296  IVLYACSHSGMVDQGINYFNTMNIDFAIIPGVEHYACLVDLLGRAARLGEAMKLIEDMPM 117
            +VLYACSHSGMVD GIN+FN M+ DF + PG EHYAC+VDL GRA RLGEAMKLI +MPM
Sbjct: 720  VVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPM 779

Query: 116  EPTPIIWVALLGACRLHSNVDLGEYAANKLSELGYEND 3
            EPTP++WVALL ACRLHSNV+LGE+AAN+L EL   ND
Sbjct: 780  EPTPVVWVALLSACRLHSNVELGEFAANRLLELESGND 817


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/98 (72%), Positives = 83/98 (84%)
 Frame = -2

Query: 296 IVLYACSHSGMVDQGINYFNTMNIDFAIIPGVEHYACLVDLLGRAARLGEAMKLIEDMPM 117
           +VLYACSHSGMVDQGINYFN MN DF ++PG EHYAC+VDLL RA RL EAM+LI  MPM
Sbjct: 586 VVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPM 645

Query: 116 EPTPIIWVALLGACRLHSNVDLGEYAANKLSELGYEND 3
           +PTP +WVALL ACR+++NV+LGEYAAN+L EL   ND
Sbjct: 646 KPTPAVWVALLSACRVYANVELGEYAANQLLELESGND 683


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/98 (72%), Positives = 83/98 (84%)
 Frame = -2

Query: 296 IVLYACSHSGMVDQGINYFNTMNIDFAIIPGVEHYACLVDLLGRAARLGEAMKLIEDMPM 117
           +VLYACSHSGMVDQGINYFN MN DF ++PG EHYAC+VDLL RA RL EAM+LI  MPM
Sbjct: 605 VVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPM 664

Query: 116 EPTPIIWVALLGACRLHSNVDLGEYAANKLSELGYEND 3
           +PTP +WVALL ACR+++NV+LGEYAAN+L EL   ND
Sbjct: 665 KPTPAVWVALLSACRVYANVELGEYAANQLLELESGND 702


>ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317576|gb|EFH47998.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 850

 Score =  151 bits (381), Expect = 6e-35
 Identities = 66/98 (67%), Positives = 79/98 (80%)
 Frame = -2

Query: 296 IVLYACSHSGMVDQGINYFNTMNIDFAIIPGVEHYACLVDLLGRAARLGEAMKLIEDMPM 117
           +VLYACSHSGM+DQG+ YFN M  DF + PG EHYACLVDLLGRA RL  A++LIE+MPM
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643

Query: 116 EPTPIIWVALLGACRLHSNVDLGEYAANKLSELGYEND 3
           EP P++WVALL  CR+H  V+LGEYAA K++EL   ND
Sbjct: 644 EPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNND 681


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/98 (68%), Positives = 83/98 (84%)
 Frame = -2

Query: 296 IVLYACSHSGMVDQGINYFNTMNIDFAIIPGVEHYACLVDLLGRAARLGEAMKLIEDMPM 117
           +VLYACSHSGM+DQGI +FN+M+ +F +IPG EHYAC+VDLLGRA RL EAM+LIE M M
Sbjct: 273 VVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQM 332

Query: 116 EPTPIIWVALLGACRLHSNVDLGEYAANKLSELGYEND 3
           EP+ I+WVALL  CR+H+NV+LGE+AA +L EL  END
Sbjct: 333 EPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEND 370


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