BLASTX nr result
ID: Lithospermum22_contig00038672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00038672
(320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27
emb|CBI23204.3| unnamed protein product [Vitis vinifera] 125 4e-27
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 118 6e-25
ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 127 bits (319), Expect = 1e-27
Identities = 58/104 (55%), Positives = 80/104 (76%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD MPERN+VPWTTIIGCYSR+G + A SL++EM +G++PS VTV++LL GV ++ +
Sbjct: 119 FDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV 178
Query: 183 LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSME 314
CLH C I YGF +S ++L N +++VYGKCG ++ RKLFD M+
Sbjct: 179 QCLHGCAILYGF-MSDINLSNSMLNVYGKCGNIEYSRKLFDYMD 221
Score = 60.8 bits (146), Expect = 1e-07
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD+M R++V W ++ Y+++G + A+ L+NEM + P +T+V+LL G QL
Sbjct: 419 FDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQL 478
Query: 183 ---LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSM 311
+H+ VI+ G L + + L+ +Y KCG +D ++ F+ M
Sbjct: 479 HLGKWIHSFVIRNG-LRPCILVDTSLVDMYCKCGDLDTAQRCFNQM 523
>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 125 bits (314), Expect = 4e-27
Identities = 57/106 (53%), Positives = 83/106 (78%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M +RN+VPWTT+IGCY+R+G+ A S+YN M +G++PS VT++ LLSGV+++V L
Sbjct: 106 FDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL 165
Query: 183 LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSMEIK 320
CLHACVI+YGF S ++L N +++VY KCGRV+D + LF+ M+ +
Sbjct: 166 QCLHACVIQYGF-GSDVALANSMLNVYCKCGRVEDAQALFELMDAR 210
Score = 55.8 bits (133), Expect = 4e-06
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M R+IV W I+ ++++G L A+ L+NEM +P +TVV+LL + L
Sbjct: 406 FDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGAL 465
Query: 183 ---LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSM 311
+H V K L + + L+ +Y KCG + +K FD M
Sbjct: 466 HQGKWIHNFVTK-SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM 510
>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 125 bits (314), Expect = 4e-27
Identities = 57/106 (53%), Positives = 83/106 (78%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M +RN+VPWTT+IGCY+R+G+ A S+YN M +G++PS VT++ LLSGV+++V L
Sbjct: 106 FDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL 165
Query: 183 LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSMEIK 320
CLHACVI+YGF S ++L N +++VY KCGRV+D + LF+ M+ +
Sbjct: 166 QCLHACVIQYGF-GSDVALANSMLNVYCKCGRVEDAQALFELMDAR 210
Score = 55.8 bits (133), Expect = 4e-06
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M R+IV W I+ ++++G L A+ L+NEM +P +TVV+LL + L
Sbjct: 406 FDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGAL 465
Query: 183 ---LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSM 311
+H V K L + + L+ +Y KCG + +K FD M
Sbjct: 466 HQGKWIHNFVTK-SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM 510
>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 118 bits (295), Expect = 6e-25
Identities = 54/104 (51%), Positives = 78/104 (75%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD MPERN+VPWT+IIGCYSR+G + A SL++EM +G++PS VT+++LL GV ++ +
Sbjct: 127 FDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV 186
Query: 183 LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSME 314
CLH I YGF +S ++L N ++S+YGKC ++ RKLFD M+
Sbjct: 187 QCLHGSAILYGF-MSDINLSNSMLSMYGKCRNIEYSRKLFDYMD 229
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M +RN+V W +I Y+++G + A+ L+NEM + P +T+V+LL G QL
Sbjct: 427 FDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQL 486
Query: 183 ---LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSM 311
+H+ VI+ G L + + L+ +Y KCG +D ++ F+ M
Sbjct: 487 HLGKWIHSFVIRNG-LRPCILVDTSLVDMYCKCGDLDIAQRCFNQM 531
>ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 113 bits (282), Expect = 2e-23
Identities = 51/106 (48%), Positives = 77/106 (72%)
Frame = +3
Query: 3 FDIMPERNIVPWTTIIGCYSRSGDLGCAISLYNEMVFEGVKPSDVTVVALLSGVMDVVQL 182
FD M +RN+VPWTTIIG YSR GD+ A S++ +M G++P+ VT+++LL G+ + L
Sbjct: 107 FDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLL 166
Query: 183 LCLHACVIKYGFLLSSLSLMNCLISVYGKCGRVDDGRKLFDSMEIK 320
LCLH +I +GF S L+L N ++++YGKCGR+ D R+LF S++ +
Sbjct: 167 LCLHCLIILHGF-ESDLALSNSMVNMYGKCGRIADARRLFQSIDCR 211