BLASTX nr result

ID: Lithospermum22_contig00038439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038439
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41046.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   159   3e-37
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28

>emb|CBI41046.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/107 (67%), Positives = 87/107 (81%)
 Frame = +1

Query: 1   HFACIVDLLGRAGYLDVTEGLVSSKHIDVDPNVWWALFSSCVAHNNLRLGEIVAGFLLET 180
           H +CIVDLLGRAGYL+  E L++SKH+ +  ++WW LFS+C AH NLRLG IVAGFLLE 
Sbjct: 137 HLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEI 196

Query: 181 EQNDSTIYVLLSNIYANSGNWEESAKLRELMRKYQVAKQPGSSWIGS 321
           EQND  +YVLLSNIYA +G WEE+A  R+LM+K +VAKQPG SWIGS
Sbjct: 197 EQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWIGS 243


>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/107 (67%), Positives = 87/107 (81%)
 Frame = +1

Query: 1   HFACIVDLLGRAGYLDVTEGLVSSKHIDVDPNVWWALFSSCVAHNNLRLGEIVAGFLLET 180
           H +CIVDLLGRAGYL+  E L++SKH+ +  ++WW LFS+C AH NLRLG IVAGFLLE 
Sbjct: 623 HLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEI 682

Query: 181 EQNDSTIYVLLSNIYANSGNWEESAKLRELMRKYQVAKQPGSSWIGS 321
           EQND  +YVLLSNIYA +G WEE+A  R+LM+K +VAKQPG SWIGS
Sbjct: 683 EQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWIGS 729


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/107 (67%), Positives = 87/107 (81%)
 Frame = +1

Query: 1   HFACIVDLLGRAGYLDVTEGLVSSKHIDVDPNVWWALFSSCVAHNNLRLGEIVAGFLLET 180
           H +CIVDLLGRAGYL+  E L++SKH+ +  ++WW LFS+C AH NLRLG IVAGFLLE 
Sbjct: 584 HLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEI 643

Query: 181 EQNDSTIYVLLSNIYANSGNWEESAKLRELMRKYQVAKQPGSSWIGS 321
           EQND  +YVLLSNIYA +G WEE+A  R+LM+K +VAKQPG SWIGS
Sbjct: 644 EQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWIGS 690


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/103 (56%), Positives = 78/103 (75%)
 Frame = +1

Query: 7   ACIVDLLGRAGYLDVTEGLVSSKHIDVDPNVWWALFSSCVAHNNLRLGEIVAGFLLETEQ 186
           +CIVDL+GR+GY+D  E ++ S       +VWWALFS+C AH NLRLG IVA  LLE E+
Sbjct: 632 SCIVDLIGRSGYIDQAESVIESAQYGEHTHVWWALFSACAAHENLRLGRIVARILLEKER 691

Query: 187 NDSTIYVLLSNIYANSGNWEESAKLRELMRKYQVAKQPGSSWI 315
           ++ ++YV+LSNIYA++G WEE+A +REL++K    KQPG SWI
Sbjct: 692 DNPSVYVVLSNIYASAGCWEEAANVRELIKKTGSMKQPGCSWI 734


>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/105 (55%), Positives = 76/105 (72%)
 Frame = +1

Query: 1   HFACIVDLLGRAGYLDVTEGLVSSKHIDVDPNVWWALFSSCVAHNNLRLGEIVAGFLLET 180
           HF+CIVDLLGR+GYLD  E ++ S +     N+ W+LFS+C AH NL LG  VA  +LE 
Sbjct: 616 HFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILER 675

Query: 181 EQNDSTIYVLLSNIYANSGNWEESAKLRELMRKYQVAKQPGSSWI 315
           + N+ ++YVLLSNI A +G WEE+A LRE+MR++   KQPG SWI
Sbjct: 676 DHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWI 720


Top