BLASTX nr result

ID: Lithospermum22_contig00038417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038417
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL63120.1| AT-hook DNA-binding protein [Catharanthus roseus]      119   5e-25
ref|XP_002285689.1| PREDICTED: uncharacterized protein LOC100255...   111   1e-22
emb|CAN74013.1| hypothetical protein VITISV_003550 [Vitis vinifera]   111   1e-22
ref|XP_002302339.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
ref|XP_003522748.1| PREDICTED: putative DNA-binding protein ESCA...   106   3e-21

>gb|ABL63120.1| AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 335

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/86 (65%), Positives = 65/86 (75%)
 Frame = +2

Query: 377 HDGATIEVIRRPRGRPPGSKNKAXXXXXXXXXXXXSMSPYVLELPPNVDIIESVFQFCHK 556
           +DGA+IEV+RRPRGRPPGSKNK             SMSPYVLELP  +DI+ES+  FC K
Sbjct: 91  NDGASIEVVRRPRGRPPGSKNKPKPPVIITRDAEPSMSPYVLELPGGIDIVESITSFCRK 150

Query: 557 RNISLCIFNGSGSVTNVTLHQPSSTP 634
           RN+ LCI NGSG+VTNVTL QPS+TP
Sbjct: 151 RNMGLCILNGSGTVTNVTLRQPSTTP 176


>ref|XP_002285689.1| PREDICTED: uncharacterized protein LOC100255831 [Vitis vinifera]
          Length = 309

 Score =  111 bits (278), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 63/85 (74%)
 Frame = +2

Query: 380 DGATIEVIRRPRGRPPGSKNKAXXXXXXXXXXXXSMSPYVLELPPNVDIIESVFQFCHKR 559
           DGATIEV+RRPRGRPPGSKNK             +MSPYVLE+P  VDI+E++ +F  +R
Sbjct: 91  DGATIEVVRRPRGRPPGSKNKPKPPVIITRDTEPAMSPYVLEVPGGVDIVEAIARFSRRR 150

Query: 560 NISLCIFNGSGSVTNVTLHQPSSTP 634
           NI LC+ NGSG+V NVTL QPS+TP
Sbjct: 151 NIGLCVLNGSGTVANVTLRQPSTTP 175


>emb|CAN74013.1| hypothetical protein VITISV_003550 [Vitis vinifera]
          Length = 417

 Score =  111 bits (278), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 63/85 (74%)
 Frame = +2

Query: 380 DGATIEVIRRPRGRPPGSKNKAXXXXXXXXXXXXSMSPYVLELPPNVDIIESVFQFCHKR 559
           DGATIEV+RRPRGRPPGSKNK             +MSPYVLE+P  VDI+E++ +F  +R
Sbjct: 199 DGATIEVVRRPRGRPPGSKNKPKPPVIITRDTEPAMSPYVLEVPGGVDIVEAIARFSRRR 258

Query: 560 NISLCIFNGSGSVTNVTLHQPSSTP 634
           NI LC+ NGSG+V NVTL QPS+TP
Sbjct: 259 NIGLCVLNGSGTVANVTLRQPSTTP 283


>ref|XP_002302339.1| predicted protein [Populus trichocarpa] gi|222844065|gb|EEE81612.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  108 bits (269), Expect = 1e-21
 Identities = 48/99 (48%), Positives = 68/99 (68%)
 Frame = +2

Query: 338 YNKLQQSTNNLSSHDGATIEVIRRPRGRPPGSKNKAXXXXXXXXXXXXSMSPYVLELPPN 517
           +++  Q + +    DGATIEV+RRPRGRPPGSKNK             SMSPY+LE+P  
Sbjct: 33  FSQQYQFSRDSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITRESEPSMSPYILEVPGG 92

Query: 518 VDIIESVFQFCHKRNISLCIFNGSGSVTNVTLHQPSSTP 634
            D++E++ +FC ++N+ +C+  GSG+V NVTL QPS+TP
Sbjct: 93  NDVVEALSRFCRRKNMGICVLTGSGTVANVTLRQPSATP 131


>ref|XP_003522748.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 280

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/90 (53%), Positives = 63/90 (70%)
 Frame = +2

Query: 365 NLSSHDGATIEVIRRPRGRPPGSKNKAXXXXXXXXXXXXSMSPYVLELPPNVDIIESVFQ 544
           N S  DGATIEV+RRPRGRPPGSKNK             +MSPY+LE+    D++E++ Q
Sbjct: 56  NSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAQ 115

Query: 545 FCHKRNISLCIFNGSGSVTNVTLHQPSSTP 634
           F H++N+ +C+  GSG+V NVTL QPS+TP
Sbjct: 116 FSHRKNMGICVLTGSGTVANVTLRQPSTTP 145


Top