BLASTX nr result

ID: Lithospermum22_contig00038406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038406
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266...    62   4e-08
ref|XP_002330897.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|AFK38242.1| unknown [Medicago truncatula]                           59   3e-07

>ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|222844911|gb|EEE82458.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = -2

Query: 289 MEFGSNIAYMLLKMALFVTVQAVVYVILSKSSNVFSKTK-RSFSFKMTTPSSIDASHVAA 113
           ME  +++A +L+K+A+FV VQ +VY ILS SSN+FSK K RSFSFK     SI     A 
Sbjct: 1   MEVEASLAEILIKVAMFVLVQVLVYAILSNSSNIFSKNKTRSFSFKPARSLSIRGFLDA- 59

Query: 112 MIADQP--AREPSPSSGNWRLLNGERSVVKDLLF 17
            I+D P  + EPSP      L  G RS  +D +F
Sbjct: 60  -ISDMPLGSSEPSP------LSRGSRSFTQDSIF 86


>ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266637 [Vitis vinifera]
          Length = 95

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
 Frame = -2

Query: 289 MEFGSNIAYMLLKMALFVTVQAVVYVILSKSSNVFSKT-KRSFSFKMTTPSSIDASHVAA 113
           M F S++A M+LK+ +FV VQA+VY+ILSKSSN+FSK  KRS  FK     S+    V A
Sbjct: 1   MAFESSLADMVLKVGMFVLVQALVYLILSKSSNIFSKNPKRSHRFK--PARSVSIRRVLA 58

Query: 112 MIADQP---AREPSPSSGNWRLLNGERS 38
            +AD P      PSPS    +LL  + S
Sbjct: 59  CLADLPPGGELSPSPSPKGPQLLPPQNS 86


>ref|XP_002330897.1| predicted protein [Populus trichocarpa] gi|222872719|gb|EEF09850.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -2

Query: 289 MEFGSNIAYMLLKMALFVTVQAVVYVILSKSSNVFSKT---KRSFSFKMTTPSSIDASHV 119
           M   S+   MLLK+ +FV VQA+VYVILSKSSN+FSKT   +RS SFK+    S+    +
Sbjct: 1   MMMESSTGDMLLKVGVFVAVQALVYVILSKSSNIFSKTHRERRSSSFKIA--RSVSIQRI 58

Query: 118 AAMIADQPA-REPSPSS 71
            A + D PA  E SP+S
Sbjct: 59  LAALQDLPAGGELSPAS 75


>ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|222849874|gb|EEE87421.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
 Frame = -2

Query: 277 SNIAYMLLKMALFVTVQAVVYVILSKSSNVFSKT--KRSFSFKMTTPSSIDASHVAAMIA 104
           S++  +LLK+A+FV VQ +VY+ILSKSSN+FSKT  KRS SFK  T  S+    + A++ 
Sbjct: 3   SSLGDVLLKVAMFVIVQGLVYLILSKSSNIFSKTNDKRSSSFK--TARSVSIRRILAVLQ 60

Query: 103 D-QPAREPSPSS 71
           D  P  E SP+S
Sbjct: 61  DLPPGGELSPAS 72


>gb|AFK38242.1| unknown [Medicago truncatula]
          Length = 81

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = -2

Query: 277 SNIAYMLLKMALFVTVQAVVYVILSKSSNVFSKT-KRSFSFKMTTPSSIDASHVAAMIAD 101
           S++  MLLK+A+FV VQA+VY+ILS SSN+FSK  KRS SFK     S+    + A ++D
Sbjct: 3   SSLGDMLLKVAMFVLVQALVYLILSNSSNIFSKNIKRSNSFK--PARSVSIRRMLAYLSD 60

Query: 100 -QPAREPSPSS 71
             P  EPSPS+
Sbjct: 61  FPPEGEPSPST 71


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