BLASTX nr result

ID: Lithospermum22_contig00038396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038396
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCN27104.1| hypothetical protein (mitochondrion) [Arabidopsi...    97   1e-18
gb|ABO86586.1| ORF108 [Brassica juncea] gi|140325912|gb|ABO86588...    89   4e-16
gb|AEZ63386.1| ORF108, partial (mitochondrion) [Brassica juncea]       82   5e-14

>emb|CCN27104.1| hypothetical protein (mitochondrion) [Arabidopsis thaliana]
          Length = 117

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
 Frame = +1

Query: 22  QPVLVHTINSLCQEIENQQN----SGPLYXXXXXXXXXXXXXXVQHLFQRHNLALPPDWT 189
           Q +LV TINSL Q IE  QN    S                  ++HLF RHNL LPP WT
Sbjct: 6   QLILVETINSLSQNIEKLQNNAISSDQFSNLVYETAANAVTKTIEHLFHRHNLTLPPRWT 65

Query: 190 YAQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303
           + QI+ DIL DD+TL  V SVL NITQLGLAS+EFHQ+
Sbjct: 66  HEQILQDILGDDLTLTNVTSVLKNITQLGLASDEFHQV 103


>gb|ABO86586.1| ORF108 [Brassica juncea] gi|140325912|gb|ABO86588.1| ORF108
           [Brassica juncea] gi|374085899|gb|AEY82410.1| orf108
           (mitochondrion) [Diplotaxis berthautii]
           gi|374683187|gb|AEZ63383.1| ORF108 (mitochondrion)
           [Brassica juncea] gi|374718767|gb|AEZ67135.1| putative
           male sterility-inducing protein (mitochondrion)
           [Brassica juncea]
          Length = 108

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
 Frame = +1

Query: 34  VHTINSLCQEIENQQNSG-------PLYXXXXXXXXXXXXXXVQHLFQRHNLALPPDWTY 192
           ++TI SL Q+IE  + +G        LY              VQ L Q HN+ LP +WT+
Sbjct: 1   MNTIKSLSQDIEELKKNGNLFDVSDQLYNNALVSVTEALTGTVQRLLQHHNVLLPENWTH 60

Query: 193 AQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303
           AQI+ DIL DD+TL  VASVL+NITQLGLAS+EFHQI
Sbjct: 61  AQIVQDILGDDMTLGNVASVLSNITQLGLASDEFHQI 97


>gb|AEZ63386.1| ORF108, partial (mitochondrion) [Brassica juncea]
          Length = 101

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 139 VQHLFQRHNLALPPDWTYAQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303
           VQ L Q HN+ LP +WT+AQI+ DIL DD+TL  VASVL+NITQLGLAS+EFHQI
Sbjct: 36  VQRLLQHHNVLLPENWTHAQIVQDILGDDMTLGNVASVLSNITQLGLASDEFHQI 90


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