BLASTX nr result
ID: Lithospermum22_contig00038396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00038396 (344 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCN27104.1| hypothetical protein (mitochondrion) [Arabidopsi... 97 1e-18 gb|ABO86586.1| ORF108 [Brassica juncea] gi|140325912|gb|ABO86588... 89 4e-16 gb|AEZ63386.1| ORF108, partial (mitochondrion) [Brassica juncea] 82 5e-14 >emb|CCN27104.1| hypothetical protein (mitochondrion) [Arabidopsis thaliana] Length = 117 Score = 97.4 bits (241), Expect = 1e-18 Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 4/98 (4%) Frame = +1 Query: 22 QPVLVHTINSLCQEIENQQN----SGPLYXXXXXXXXXXXXXXVQHLFQRHNLALPPDWT 189 Q +LV TINSL Q IE QN S ++HLF RHNL LPP WT Sbjct: 6 QLILVETINSLSQNIEKLQNNAISSDQFSNLVYETAANAVTKTIEHLFHRHNLTLPPRWT 65 Query: 190 YAQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303 + QI+ DIL DD+TL V SVL NITQLGLAS+EFHQ+ Sbjct: 66 HEQILQDILGDDLTLTNVTSVLKNITQLGLASDEFHQV 103 >gb|ABO86586.1| ORF108 [Brassica juncea] gi|140325912|gb|ABO86588.1| ORF108 [Brassica juncea] gi|374085899|gb|AEY82410.1| orf108 (mitochondrion) [Diplotaxis berthautii] gi|374683187|gb|AEZ63383.1| ORF108 (mitochondrion) [Brassica juncea] gi|374718767|gb|AEZ67135.1| putative male sterility-inducing protein (mitochondrion) [Brassica juncea] Length = 108 Score = 89.0 bits (219), Expect = 4e-16 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 7/97 (7%) Frame = +1 Query: 34 VHTINSLCQEIENQQNSG-------PLYXXXXXXXXXXXXXXVQHLFQRHNLALPPDWTY 192 ++TI SL Q+IE + +G LY VQ L Q HN+ LP +WT+ Sbjct: 1 MNTIKSLSQDIEELKKNGNLFDVSDQLYNNALVSVTEALTGTVQRLLQHHNVLLPENWTH 60 Query: 193 AQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303 AQI+ DIL DD+TL VASVL+NITQLGLAS+EFHQI Sbjct: 61 AQIVQDILGDDMTLGNVASVLSNITQLGLASDEFHQI 97 >gb|AEZ63386.1| ORF108, partial (mitochondrion) [Brassica juncea] Length = 101 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/55 (70%), Positives = 46/55 (83%) Frame = +1 Query: 139 VQHLFQRHNLALPPDWTYAQIINDILSDDITLLKVASVLNNITQLGLASNEFHQI 303 VQ L Q HN+ LP +WT+AQI+ DIL DD+TL VASVL+NITQLGLAS+EFHQI Sbjct: 36 VQRLLQHHNVLLPENWTHAQIVQDILGDDMTLGNVASVLSNITQLGLASDEFHQI 90