BLASTX nr result

ID: Lithospermum22_contig00038375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038375
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002275564.1| PREDICTED: transcription factor bHLH120-like...    65   4e-09
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vit...    57   1e-06

>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
 Frame = -1

Query: 377 LSLARDGMK---NQSFDHTTTIGTENFPDLSQTSVTIRPTLTGFEVLMNTAFAG-GVKIS 210
           LS  RDG+K   N SFD  +    +  P    + VT++P   G EV+ ++ F G    +S
Sbjct: 130 LSAKRDGLKKSPNLSFDSPSGSSNKYSPI---SPVTLQPYPGGIEVVFDSDFRGQDSPLS 186

Query: 209 AALNIISQEGLSIVRCNSSRVDGRLLHSIETKVNEGMCIDPTELERKL 66
             L ++ +EG+S+V C S++V+ RL H+++T+VN+  C++ +EL +KL
Sbjct: 187 RVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLSELRQKL 234


>ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/89 (37%), Positives = 56/89 (62%)
 Frame = -1

Query: 332 TTTIGTENFPDLSQTSVTIRPTLTGFEVLMNTAFAGGVKISAALNIISQEGLSIVRCNSS 153
           +T+   EN     + ++T+R    G EV +NTA   G  +S  L I+ +EG S+V C S+
Sbjct: 148 STSSALENLEGCERDTLTVRTRCVGVEVDINTALKKGFPLSRVLAILIEEGFSVVSCIST 207

Query: 152 RVDGRLLHSIETKVNEGMCIDPTELERKL 66
           +V+ R+LH+I ++V +G  +D +EL++KL
Sbjct: 208 KVNERMLHNIISEVTDGRSLDISELQQKL 236


>ref|XP_002275564.1| PREDICTED: transcription factor bHLH120-like [Vitis vinifera]
          Length = 196

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = -1

Query: 299 LSQTSVTIRPTLTGFEVLMNTAFAGGVKISAALNIISQEGLSIVRCNSSRVDGRLLHSIE 120
           L  + VT+ P   G EVL++T F  G+ +S  L++++ E LSIV C+S++V+G LLHS E
Sbjct: 119 LECSCVTVEPCWAGVEVLVSTGFTQGLPLSRVLSVLTSEDLSIVSCSSTKVNGMLLHSTE 178

Query: 119 TKVNEG 102
           ++VN+G
Sbjct: 179 SEVNDG 184


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/78 (34%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -1

Query: 296 SQTSVTIRPTLTGFEVLMNTAFAG-GVKISAALNIISQEGLSIVRCNSSRVDGRLLHSIE 120
           S +SV ++P   G E+  ++   G  + +S  L ++ +EG+S++ C S++V+ RL HS++
Sbjct: 157 SSSSVALQPYPGGIEITFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQ 216

Query: 119 TKVNEGMCIDPTELERKL 66
           T+VN+  C++ +EL +KL
Sbjct: 217 TEVNDPTCLNLSELWQKL 234


>ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084087|emb|CBI24475.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -1

Query: 365 RDGMK---NQSFDHTTTIGTENFPDLSQTSVTIRPTLTGFEVLMNTAFAGGVKISAALNI 195
           RD +K   N S  H  +  +E  P      V + P L G E+L++  F     +S  + +
Sbjct: 97  RDALKRQCNMSASHLESRSSEICPP---NCVVVSPCLGGVEILVSGGFREEGLLSRVMEL 153

Query: 194 ISQEGLSIVRCNSSRVDGRLLHSIETKVNEGMCIDPTELERKLRD 60
           + +E LS+V C S++V+  LLH+I  KV +  C+D + L++KL D
Sbjct: 154 LFEERLSVVSCVSTKVNEGLLHTINCKVADPSCVDLSMLQQKLLD 198


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