BLASTX nr result
ID: Lithospermum22_contig00038359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00038359
(472 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527141.1| protein binding protein, putative [Ricinus c... 172 2e-41
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra... 154 5e-36
ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2... 151 5e-35
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei... 151 6e-35
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max] 149 2e-34
>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
gi|223533501|gb|EEF35243.1| protein binding protein,
putative [Ricinus communis]
Length = 4704
Score = 172 bits (437), Expect = 2e-41
Identities = 86/157 (54%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
Frame = +2
Query: 5 DIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAE 184
D SSN I R F + EERDELR+FLLDPKWY+ + S I CK LP++++YG
Sbjct: 777 DATSSNGGIVRAFHN-LRAEERDELRRFLLDPKWYMADYNDGSIIRNCKMLPIYKIYGGG 835
Query: 185 PHLQ--YSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQ 358
+ +SDL +S KYLPP N PD+ G++FI +KIEE++L RYYGIERMGKA+FYR+
Sbjct: 836 SYADVLFSDLENSQKYLPPLNVPDNFLGSEFIMTSSKIEEEILGRYYGIERMGKARFYRE 895
Query: 359 RVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
+V D +KEL+ E RD++MLS+L+ LPQLC EDV F+E
Sbjct: 896 QVFDNIKELQPEVRDNIMLSVLQNLPQLCVEDVTFRE 932
Score = 65.1 bits (157), Expect = 6e-09
Identities = 43/155 (27%), Positives = 75/155 (48%)
Frame = +2
Query: 8 IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
I +++ +F E E ELR F+L KW+ + ++D I K LPVF + +
Sbjct: 2185 IAGKQENVEELFAAASE-SELHELRSFVLQSKWFFVEQMDDHCIDVIKHLPVFESHTSRK 2243
Query: 188 HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
+ S +K+L P+ + L + F+ ++ E +L RY I A+FY+ VL
Sbjct: 2244 LVSLSK---PAKWLKPNGVREDLLDDDFVRTESERERIILTRYLEIREPSTAEFYKTFVL 2300
Query: 368 DRVKELESEFRDSMMLSILKELPQLCAEDVYFKET 472
+R+ E S+ ++ +IL ++ L D+ K T
Sbjct: 2301 NRMSEFLSQ--REVLAAILNDVKLLINNDISIKST 2333
>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317873|gb|EFH48295.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 4711
Score = 154 bits (390), Expect = 5e-36
Identities = 78/158 (49%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYG- 178
FD SS+ D + V + +E+DELR FLLDPKW+I I D ++ CK LP++R+YG
Sbjct: 769 FDAASSDMDGVQNLVYDLNAQEKDELRSFLLDPKWHIGHQIGDLYLRICKILPIYRIYGE 828
Query: 179 -AEPHLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYR 355
+ YSDL++ KYLPP + P L G +F+ C EEDVL+RYYGIERM K+ FYR
Sbjct: 829 ISAQEFNYSDLVNPPKYLPPLDVPACLLGCEFVICCQGSEEDVLSRYYGIERMRKSNFYR 888
Query: 356 QRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
Q V +R++ L+ E RD +M+SIL+ LPQLC ED +E
Sbjct: 889 QNVFNRIEVLQPEIRDQVMISILQNLPQLCLEDRLLRE 926
Score = 66.6 bits (161), Expect = 2e-09
Identities = 41/150 (27%), Positives = 75/150 (50%)
Frame = +2
Query: 8 IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
+ +++I+ +F+ E E ELR F+L KW+ ++N+ H K LP+F Y +
Sbjct: 2174 VSGGHENIKGIFLNVSE-GELHELRNFILQSKWFSGGHMNEVHFETIKHLPIFESYRSRK 2232
Query: 188 HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
+ + + +L P + L + F+ ++ E + RY I+ K +FY+ VL
Sbjct: 2233 LVSLNCPV---MWLKPDGIREDLLDDDFVRLDSERERAIFKRYLQIKEPSKMEFYKACVL 2289
Query: 368 DRVKELESEFRDSMMLSILKELPQLCAEDV 457
+R+ E S+ +L+IL +L L +DV
Sbjct: 2290 NRMSEFLSQ--QEALLAILHDLNDLVVDDV 2317
>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
predicted protein [Populus trichocarpa]
Length = 2870
Score = 151 bits (382), Expect = 5e-35
Identities = 79/159 (49%), Positives = 107/159 (67%), Gaps = 3/159 (1%)
Frame = +2
Query: 2 FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGA 181
F++VSS I + + E+RDELR FLL PKWY+ I+ I C+RLP++RV+G
Sbjct: 784 FNVVSSAGGIAQTSFDNLRPEDRDELRGFLLAPKWYMGDCIDGFVIRNCRRLPIYRVHG- 842
Query: 182 EPHLQ---YSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFY 352
E ++ +SDL + KYLPP PD+ G++FI + IEED+L RYYG+ERMGKA FY
Sbjct: 843 EGSVEGAIFSDLENPQKYLPPLEVPDNFLGHEFIASSSNIEEDILLRYYGVERMGKAHFY 902
Query: 353 RQRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
RQ+V + V+ L+ E RD MLS+L+ LPQLC ED F+E
Sbjct: 903 RQQVFNNVRILQPEVRDRTMLSVLQNLPQLCVEDASFRE 941
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/134 (29%), Positives = 67/134 (50%)
Frame = +2
Query: 65 ERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEPHLQYSDLIDSSKYLPPHNS 244
E ELR F+L KW+ +++ D HI K LP+F Y + + L +++L P
Sbjct: 2213 ELHELRSFVLQSKWFSEESMTDIHIEIIKHLPMFEAYKSR---KLVSLCKPNQWLKPDGV 2269
Query: 245 PDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVLDRVKELESEFRDSMMLSIL 424
D L + F+ ++ E +L RY I+ + +FY+ VL+R+ E S + +IL
Sbjct: 2270 RDDLLDDDFVRADSERERIILRRYLEIKEPSRVEFYKVYVLNRMSEFIS--HQGALTAIL 2327
Query: 425 KELPQLCAEDVYFK 466
++ L +D+ K
Sbjct: 2328 HDVKLLIEDDISIK 2341
>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
product [Arabidopsis thaliana]
gi|332005740|gb|AED93123.1| C3HC4-type RING finger
domain-containing protein [Arabidopsis thaliana]
Length = 4706
Score = 151 bits (381), Expect = 6e-35
Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYG- 178
FD SS+ D + + + +E+DELR FLLDPKW+I I D ++ CK LP+ R+YG
Sbjct: 769 FDAASSDLDGVQNLIYDLNAQEKDELRSFLLDPKWHIGHQIGDLYLRICKILPIHRIYGE 828
Query: 179 -AEPHLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYR 355
+ +YSDL++ K+LPP + P L G +FI C EEDVL+RYYGIERM K+ FYR
Sbjct: 829 TSAQESKYSDLVNPPKHLPPLDVPACLLGCEFILCCQGSEEDVLSRYYGIERMRKSNFYR 888
Query: 356 QRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
Q V +R++ L+ E RD +M+SIL++LPQLC ED +E
Sbjct: 889 QNVFNRIEVLQPEIRDQVMISILQDLPQLCLEDRLLRE 926
Score = 68.6 bits (166), Expect = 5e-10
Identities = 43/150 (28%), Positives = 75/150 (50%)
Frame = +2
Query: 8 IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
I +++I+ +F+ E E ELR F+L KW+ ++N+ H K LP+F Y +
Sbjct: 2174 ISGGHENIKGIFLNVSE-GELHELRNFILQSKWFSGGHMNEVHFETIKHLPIFESYRSRK 2232
Query: 188 HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
+ + + K+L P + L + F+ ++ E + RY I+ K +FY+ VL
Sbjct: 2233 LVSLNCPV---KWLKPDGIREDLLDDDFVRLDSERERTIFKRYLQIKEPSKMEFYKACVL 2289
Query: 368 DRVKELESEFRDSMMLSILKELPQLCAEDV 457
+R+ E S+ +L+IL +L L DV
Sbjct: 2290 NRMSEFLSQ--QEALLAILHDLNDLVVADV 2317
>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
Length = 4760
Score = 149 bits (376), Expect = 2e-34
Identities = 79/160 (49%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Frame = +2
Query: 2 FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGA 181
F+ VS D + F V EER+ELR+FLLDPKWY+ +++++ I CKRLP+FRVYG
Sbjct: 768 FNAVSGPDVMHASFDSLVT-EERNELRRFLLDPKWYVGRSMDEFSIRFCKRLPIFRVYGR 826
Query: 182 EP--HLQYSDLIDSSKYLPPHNSPDS-LYGNQFINCPTKIEEDVLNRYYGIERMGKAQFY 352
+ Q+SDL + KYLPP + P+ L G +F+ + IE DVL+RYYG+ERMGKAQFY
Sbjct: 827 DSAQDYQFSDLENPRKYLPPLDVPEIILVGIEFMVKSSNIEGDVLSRYYGVERMGKAQFY 886
Query: 353 RQRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKET 472
+Q V +RV +L+++ RDS+MLS+L+ LP L ED+ +++
Sbjct: 887 QQHVFNRVGDLQADVRDSIMLSVLQNLPLLSLEDISIRDS 926
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/136 (29%), Positives = 72/136 (52%)
Frame = +2
Query: 65 ERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEPHLQYSDLIDSSKYLPPHNS 244
E ELR F+L KW+ + I+D HI K+LP+F Y + + S+ I K+L P
Sbjct: 2201 ELHELRSFILQSKWFSEEQIDDKHIEIIKQLPIFESYKSRKLVSLSNPI---KWLGPTGV 2257
Query: 245 PDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVLDRVKELESEFRDSMMLSIL 424
+ L ++FI +++E ++ RY G++ K +FYR + + + E + ++ +IL
Sbjct: 2258 CEDLLNDKFIRTESEMERVIMKRYLGMKEPTKVEFYRDHIFNHISEFLP--KQKVVSAIL 2315
Query: 425 KELPQLCAEDVYFKET 472
++ L ED+ K +
Sbjct: 2316 HDVQHLIKEDLSLKSS 2331