BLASTX nr result

ID: Lithospermum22_contig00038359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038359
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   172   2e-41
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   154   5e-36
ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   151   6e-35
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              149   2e-34

>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
            gi|223533501|gb|EEF35243.1| protein binding protein,
            putative [Ricinus communis]
          Length = 4704

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/157 (54%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
 Frame = +2

Query: 5    DIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAE 184
            D  SSN  I R F   +  EERDELR+FLLDPKWY+    + S I  CK LP++++YG  
Sbjct: 777  DATSSNGGIVRAFHN-LRAEERDELRRFLLDPKWYMADYNDGSIIRNCKMLPIYKIYGGG 835

Query: 185  PHLQ--YSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQ 358
             +    +SDL +S KYLPP N PD+  G++FI   +KIEE++L RYYGIERMGKA+FYR+
Sbjct: 836  SYADVLFSDLENSQKYLPPLNVPDNFLGSEFIMTSSKIEEEILGRYYGIERMGKARFYRE 895

Query: 359  RVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
            +V D +KEL+ E RD++MLS+L+ LPQLC EDV F+E
Sbjct: 896  QVFDNIKELQPEVRDNIMLSVLQNLPQLCVEDVTFRE 932



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/155 (27%), Positives = 75/155 (48%)
 Frame = +2

Query: 8    IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
            I    +++  +F    E  E  ELR F+L  KW+  + ++D  I   K LPVF  + +  
Sbjct: 2185 IAGKQENVEELFAAASE-SELHELRSFVLQSKWFFVEQMDDHCIDVIKHLPVFESHTSRK 2243

Query: 188  HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
             +  S     +K+L P+   + L  + F+   ++ E  +L RY  I     A+FY+  VL
Sbjct: 2244 LVSLSK---PAKWLKPNGVREDLLDDDFVRTESERERIILTRYLEIREPSTAEFYKTFVL 2300

Query: 368  DRVKELESEFRDSMMLSILKELPQLCAEDVYFKET 472
            +R+ E  S+    ++ +IL ++  L   D+  K T
Sbjct: 2301 NRMSEFLSQ--REVLAAILNDVKLLINNDISIKST 2333


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317873|gb|EFH48295.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/158 (49%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2    FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYG- 178
            FD  SS+ D  +  V  +  +E+DELR FLLDPKW+I   I D ++  CK LP++R+YG 
Sbjct: 769  FDAASSDMDGVQNLVYDLNAQEKDELRSFLLDPKWHIGHQIGDLYLRICKILPIYRIYGE 828

Query: 179  -AEPHLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYR 355
             +     YSDL++  KYLPP + P  L G +F+ C    EEDVL+RYYGIERM K+ FYR
Sbjct: 829  ISAQEFNYSDLVNPPKYLPPLDVPACLLGCEFVICCQGSEEDVLSRYYGIERMRKSNFYR 888

Query: 356  QRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
            Q V +R++ L+ E RD +M+SIL+ LPQLC ED   +E
Sbjct: 889  QNVFNRIEVLQPEIRDQVMISILQNLPQLCLEDRLLRE 926



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/150 (27%), Positives = 75/150 (50%)
 Frame = +2

Query: 8    IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
            +   +++I+ +F+   E  E  ELR F+L  KW+   ++N+ H    K LP+F  Y +  
Sbjct: 2174 VSGGHENIKGIFLNVSE-GELHELRNFILQSKWFSGGHMNEVHFETIKHLPIFESYRSRK 2232

Query: 188  HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
             +  +  +    +L P    + L  + F+   ++ E  +  RY  I+   K +FY+  VL
Sbjct: 2233 LVSLNCPV---MWLKPDGIREDLLDDDFVRLDSERERAIFKRYLQIKEPSKMEFYKACVL 2289

Query: 368  DRVKELESEFRDSMMLSILKELPQLCAEDV 457
            +R+ E  S+     +L+IL +L  L  +DV
Sbjct: 2290 NRMSEFLSQ--QEALLAILHDLNDLVVDDV 2317


>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
            predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  151 bits (382), Expect = 5e-35
 Identities = 79/159 (49%), Positives = 107/159 (67%), Gaps = 3/159 (1%)
 Frame = +2

Query: 2    FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGA 181
            F++VSS   I +     +  E+RDELR FLL PKWY+   I+   I  C+RLP++RV+G 
Sbjct: 784  FNVVSSAGGIAQTSFDNLRPEDRDELRGFLLAPKWYMGDCIDGFVIRNCRRLPIYRVHG- 842

Query: 182  EPHLQ---YSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFY 352
            E  ++   +SDL +  KYLPP   PD+  G++FI   + IEED+L RYYG+ERMGKA FY
Sbjct: 843  EGSVEGAIFSDLENPQKYLPPLEVPDNFLGHEFIASSSNIEEDILLRYYGVERMGKAHFY 902

Query: 353  RQRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
            RQ+V + V+ L+ E RD  MLS+L+ LPQLC ED  F+E
Sbjct: 903  RQQVFNNVRILQPEVRDRTMLSVLQNLPQLCVEDASFRE 941



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/134 (29%), Positives = 67/134 (50%)
 Frame = +2

Query: 65   ERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEPHLQYSDLIDSSKYLPPHNS 244
            E  ELR F+L  KW+  +++ D HI   K LP+F  Y +    +   L   +++L P   
Sbjct: 2213 ELHELRSFVLQSKWFSEESMTDIHIEIIKHLPMFEAYKSR---KLVSLCKPNQWLKPDGV 2269

Query: 245  PDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVLDRVKELESEFRDSMMLSIL 424
             D L  + F+   ++ E  +L RY  I+   + +FY+  VL+R+ E  S      + +IL
Sbjct: 2270 RDDLLDDDFVRADSERERIILRRYLEIKEPSRVEFYKVYVLNRMSEFIS--HQGALTAIL 2327

Query: 425  KELPQLCAEDVYFK 466
             ++  L  +D+  K
Sbjct: 2328 HDVKLLIEDDISIK 2341


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
            thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332005740|gb|AED93123.1| C3HC4-type RING finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  151 bits (381), Expect = 6e-35
 Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2    FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYG- 178
            FD  SS+ D  +  +  +  +E+DELR FLLDPKW+I   I D ++  CK LP+ R+YG 
Sbjct: 769  FDAASSDLDGVQNLIYDLNAQEKDELRSFLLDPKWHIGHQIGDLYLRICKILPIHRIYGE 828

Query: 179  -AEPHLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYR 355
             +    +YSDL++  K+LPP + P  L G +FI C    EEDVL+RYYGIERM K+ FYR
Sbjct: 829  TSAQESKYSDLVNPPKHLPPLDVPACLLGCEFILCCQGSEEDVLSRYYGIERMRKSNFYR 888

Query: 356  QRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKE 469
            Q V +R++ L+ E RD +M+SIL++LPQLC ED   +E
Sbjct: 889  QNVFNRIEVLQPEIRDQVMISILQDLPQLCLEDRLLRE 926



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/150 (28%), Positives = 75/150 (50%)
 Frame = +2

Query: 8    IVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEP 187
            I   +++I+ +F+   E  E  ELR F+L  KW+   ++N+ H    K LP+F  Y +  
Sbjct: 2174 ISGGHENIKGIFLNVSE-GELHELRNFILQSKWFSGGHMNEVHFETIKHLPIFESYRSRK 2232

Query: 188  HLQYSDLIDSSKYLPPHNSPDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVL 367
             +  +  +   K+L P    + L  + F+   ++ E  +  RY  I+   K +FY+  VL
Sbjct: 2233 LVSLNCPV---KWLKPDGIREDLLDDDFVRLDSERERTIFKRYLQIKEPSKMEFYKACVL 2289

Query: 368  DRVKELESEFRDSMMLSILKELPQLCAEDV 457
            +R+ E  S+     +L+IL +L  L   DV
Sbjct: 2290 NRMSEFLSQ--QEALLAILHDLNDLVVADV 2317


>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/160 (49%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
 Frame = +2

Query: 2    FDIVSSNDDIRRVFVQFVELEERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGA 181
            F+ VS  D +   F   V  EER+ELR+FLLDPKWY+ +++++  I  CKRLP+FRVYG 
Sbjct: 768  FNAVSGPDVMHASFDSLVT-EERNELRRFLLDPKWYVGRSMDEFSIRFCKRLPIFRVYGR 826

Query: 182  EP--HLQYSDLIDSSKYLPPHNSPDS-LYGNQFINCPTKIEEDVLNRYYGIERMGKAQFY 352
            +     Q+SDL +  KYLPP + P+  L G +F+   + IE DVL+RYYG+ERMGKAQFY
Sbjct: 827  DSAQDYQFSDLENPRKYLPPLDVPEIILVGIEFMVKSSNIEGDVLSRYYGVERMGKAQFY 886

Query: 353  RQRVLDRVKELESEFRDSMMLSILKELPQLCAEDVYFKET 472
            +Q V +RV +L+++ RDS+MLS+L+ LP L  ED+  +++
Sbjct: 887  QQHVFNRVGDLQADVRDSIMLSVLQNLPLLSLEDISIRDS 926



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/136 (29%), Positives = 72/136 (52%)
 Frame = +2

Query: 65   ERDELRQFLLDPKWYIHKNINDSHIWKCKRLPVFRVYGAEPHLQYSDLIDSSKYLPPHNS 244
            E  ELR F+L  KW+  + I+D HI   K+LP+F  Y +   +  S+ I   K+L P   
Sbjct: 2201 ELHELRSFILQSKWFSEEQIDDKHIEIIKQLPIFESYKSRKLVSLSNPI---KWLGPTGV 2257

Query: 245  PDSLYGNQFINCPTKIEEDVLNRYYGIERMGKAQFYRQRVLDRVKELESEFRDSMMLSIL 424
             + L  ++FI   +++E  ++ RY G++   K +FYR  + + + E     +  ++ +IL
Sbjct: 2258 CEDLLNDKFIRTESEMERVIMKRYLGMKEPTKVEFYRDHIFNHISEFLP--KQKVVSAIL 2315

Query: 425  KELPQLCAEDVYFKET 472
             ++  L  ED+  K +
Sbjct: 2316 HDVQHLIKEDLSLKSS 2331


Top